etnppl (LOC106577459)


Basic Information

Item Value
gene id etnppl
gene name LOC106577459
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32555359 ~ 32594324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615425.2
GTAGTAATTCAGTACTTTATCATGAGTTATAGGCTGATCATGCGTCACCAGCTGTGATTTGCGGTCAGTGTCCTTGCGTTGCCGTTTTCACAGCAGAAATGAAAATGTGTCTAGAGGGCAGTATTGTGCTGCAAatccgtgtgcgtgcgtgtgcctgCGCGGGTCCGTTGCAACGCAATTTCTGGACTGACAAAACGGAGATAAATGAGGGACAACTGATCATTTTCTCTGAATGAAAGAACGCCAGGATGACAGCAGAAATGTTTCCTAAGGAGAAGACCATCGATCTTCGGAAAAAGCACATTGGTCCATCATGTAAGGTGTTCTTCAGCCATGATCCCATCAAGATTGTGCGGGCCAAAGGCCAGTACATGTATGACGAGAATGGTGTGCGATACTTGGACTGCATCAACAACGTTGCACACGTGGGTCACAGTCACCCAATGGTGGTGAAGGCTGGGGCTGAACAGATGGAACTACTGAATACTAACTCACGCTTCCTGCATGATAACCTTGTCCAGTACGCCCAGAGGCTGCAGGCTACTCTACCTGAAAAGCTCTCTGTTTGCTACTTTGTCAACTCAGGCTCTGAAGCCAACGACCTGGCACTCAGACTGGCCTGGGAGTACACAGGCCACAAAGACGTCATAACGTTGGACAATGCCTATCACGGCCACGTGTCATCGCTCATTAACATCAGCCCTTATAAATTTCACCAGTTGGCCAATGCAGAGCAGAGCAAATCTGTTCACGTGGCTCTGAGCCCTGACCTCTACAGAGGCAACTATAGACAAGACCATCCAGACCCCGCCACAGCATATGCCGATGACGTCAACAATCTTATACAGAAAGCCCATGAAAAAGGACACAAGGTTGCTGCTTTTATTGCAGAGTCGCTGCAGAGTTGTGGTGGGCAAGTCATTCCCCCTGCAGGCTACTTCCAGAAAGTGGCACAACATGTTCACCAGGCTGGTGGCCTATTCATCGCTGACGAGGTGCAGGTGGGATTTGGCCGTGTTGGCACCCACTTCTGGGCCTTCCAGCTACAGGGAGAAGACTTTGTGCCTGACATTGTCACCATGGGCAAACCCATCGGCAACGGGCACCCCATGTCATGTGTGGTCACCACAAGAGAGGTAGCAGAGGCCTTCAAGAACTCTGGCATGGAGTACTTCAACACGTTTGGCGGTAACCCTGTGTCCTGTGCCATTGGCCTTGCTGTGCTGGACGTGATTGAGAAAGAGGATCTCCAAGGCAACGCGTTGCGAGTGGGGGGCTACCTGATGCGACTGCTGGAGCAGCAGAAAGAGAAGCATCCACTAGTGGGGGatatcagGGGTCGTGGCCTGTTTGTTGGGGCGGAGCTTGTGAGAGATCGGGTGAAACTGACCCCTGCTACAGCGGAAGCTCAGGACATCATTTACAAACTGAAGGAACAACACATCCTACTAAGTGCAGATGGTCCTCATCGCAATGTCCTCAAGTTCAAACCACCCATGTGCTTCTCTGAGGAGGACGCCGACATGGTCGTGGAAAAGATTGACCAGATTCTCACAGacattGAGAAGGCGTTGGGGTTACAAATGCCCTCCACAGTACATACAGAAAATGGAAGCCATAAGAGAAATGTTCAACCTGAGGAAAACGGATGTCATCATTCAAATGGAATAGGCCATAGCCGTGATACGTCTCAACAGCATGCCTCTCAGCAAAACAAAAGGCTGAGGCCTTAATGGACTTGTGGAGTTTTGCTACTGTCTTATAAGACCTGAATAGTGTGCCCTGCACACTTACATGTTTCAATGGATAAAGGAAGCGACTTCATTCTCAAACCTATAATTACTTTTTGTAAGCATTTATAATATGTTAGTTACACATTGATGTTATAATCCTAATCTCAGGTACTTTGAAATGTGATTGGAAATTTGGCCAGGCATGTATGTTCCTCTGTATACAGACAAATGCAGATGAACTAGAAACCCATATTGACAGTGAGGAACAAACTTAATGTGCTAATGTCTAGGATGTCTTTAGAGTCATGCATTGATCCCTCACTGTGACTTCATATTAAATAGTAAATGACAATGATTACAAATGCTAACTTTTTCAAAGTATCATTATGAAATATAAAGAACATGCCTACTGAAAAGACTATAAAGTAGTATTGGCCATTGTCATGTTATTGCCCACATTTAGAGGTTCTTCAATGAAAGCGTTGTTCtacaaaaatgtcaaataaacAATGCAGACAGAGGGAACAGAATTGTTTA

Function

NR:

description
ethanolamine-phosphate phospho-lyase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0035162 embryonic hemopoiesis biological_process
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0008483 transaminase activity molecular_function

KEGG:

id description
K14286 AGXT2L1, ETNPPL; ethanolamine-phosphate phospho-lyase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615425.2 True 2270 mRNA 0.47 13 32555359 32594324

Neighbor

gene id symbol gene type direction distance location
LOC110531930 NA coding downstream 35263 32516069 ~ 32520096 (-)
LOC118966026 NA coding downstream 41363 32513091 ~ 32513996 (-)
LOC110531927 LOC106577456 coding downstream 107458 32274254 ~ 32447901 (-)
LOC118966025 NA coding downstream 311437 32241007 ~ 32243922 (-)
LOC110531926 NA coding downstream 315896 32222074 ~ 32239463 (-)
LOC110531933 NA coding upstream 5043 32599367 ~ 32956074 (-)
trnap-agg-9 NA coding upstream 435413 33029737 ~ 33029808 (-)
trnap-agg-10 NA coding upstream 436797 33031121 ~ 33031192 (-)
trnap-agg-11 NA coding upstream 438185 33032509 ~ 33032580 (-)
trnap-agg-12 NA coding upstream 439570 33033894 ~ 33033965 (-)
G795170 NA non-coding downstream 6352 32536510 ~ 32549007 (-)
G795182 NA non-coding downstream 13180 32541166 ~ 32542179 (-)
G795171 NA non-coding downstream 35320 32513096 ~ 32520039 (-)
G795177 NA non-coding downstream 52990 32501741 ~ 32502369 (-)
G795175 rpl34 non-coding downstream 56430 32494470 ~ 32498929 (-)
G795188 NA non-coding upstream 46 32594370 ~ 32594623 (-)
G795198 NA non-coding upstream 33418 32627742 ~ 32651703 (-)
G795236 NA non-coding upstream 91858 32686182 ~ 32715890 (-)
G795258 NA non-coding upstream 121653 32715977 ~ 32716239 (-)
G795264 NA non-coding upstream 131572 32725896 ~ 32726113 (-)
G794311 LOC106577443 other downstream 527091 32026071 ~ 32028445 (-)
G793842 NA other downstream 893161 31661239 ~ 31662198 (-)
G793489 NA other downstream 1136386 31418455 ~ 31418973 (-)
G793472 NA other downstream 1151490 31403482 ~ 31403869 (-)
G792267 NA other downstream 2197395 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1456735 34051059 ~ 34057549 (-)
G797605 NA other upstream 2275631 34869955 ~ 34875879 (-)
G798195 NA other upstream 2759895 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2791529 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2897702 35492026 ~ 35521884 (-)

Expression


Co-expression Network