trnag-ucc-5



Basic Information


Item Value
gene id trnag-ucc-5
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33036717 ~ 33036788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-5
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-5 True 72 mRNA 0.56 1 33036717 33036788

Neighbor


gene id symbol gene type direction distance location
trnap-agg-13 NA coding downstream 836 33035809 ~ 33035881 (-)
trnap-agg-12 NA coding downstream 2752 33033894 ~ 33033965 (-)
trnap-agg-11 NA coding downstream 4137 33032509 ~ 33032580 (-)
trnap-agg-10 NA coding downstream 5525 33031121 ~ 33031192 (-)
trnap-agg-9 NA coding downstream 6909 33029737 ~ 33029808 (-)
trnap-agg-14 NA coding upstream 1958 33038746 ~ 33038817 (-)
trnap-agg-15 NA coding upstream 3355 33040143 ~ 33040214 (-)
trnap-agg-16 NA coding upstream 4752 33041540 ~ 33041611 (-)
trnap-agg-17 NA coding upstream 6163 33042951 ~ 33043022 (-)
trnap-agg-18 NA coding upstream 7574 33044362 ~ 33044433 (-)
G795449 NA non-coding downstream 1962 33032351 ~ 33034755 (-)
G795420 NA non-coding downstream 7534 32971460 ~ 33029183 (-)
G795421 NA non-coding downstream 28353 32993891 ~ 33008364 (-)
G795267 NA non-coding downstream 308324 32728155 ~ 32728393 (-)
G795266 NA non-coding downstream 308888 32727581 ~ 32727829 (-)
G795456 NA non-coding upstream 9492 33046280 ~ 33066485 (-)
G795448 NA non-coding upstream 26382 33063170 ~ 33068719 (-)
G795461 NA non-coding upstream 59362 33096150 ~ 33098013 (-)
G795464 NA non-coding upstream 79417 33116205 ~ 33123267 (-)
G795474 NA non-coding upstream 199172 33235960 ~ 33236337 (-)
G794311 LOC106577443 other downstream 1008449 32026071 ~ 32028445 (-)
G793842 NA other downstream 1374519 31661239 ~ 31662198 (-)
G793489 NA other downstream 1617744 31418455 ~ 31418973 (-)
G793472 NA other downstream 1632848 31403482 ~ 31403869 (-)
G792267 NA other downstream 2678753 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1014271 34051059 ~ 34057549 (-)
G797605 NA other upstream 1833167 34869955 ~ 34875879 (-)
G798195 NA other upstream 2317431 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2349065 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2455238 35492026 ~ 35521884 (-)

Expression



Co-expression Network