trnag-ucc-10


Basic Information

Item Value
gene id trnag-ucc-10
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33046280 ~ 33049435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-10
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca
>TU905384
ctgcttatgttacccctccatatctgcagtgaaagatggtggacctagatcggtttttgtcaaaccatgagacaatacctataatcggtcttctcacaaaaacatctctagcttccgaaccgtttgacctacaaattcatatgaccactctctggaatgaggagaccctcacgaacacggtggtattttttctctacatcccccacaagtgtcaggagactcgtctgaagtcacaaccgtctatgtgccaagttctgtttgtagaatccaaaatcttgggctacaaactaatgtgaccccacttgtcgcaatgttctccgttttgccctacgttcccaacaagtgtcacgggactaatctgaaggtaacctgtagtgattaaaatgatagattttttaaccagggacctctcgcaacctaagccataatcatacacctaaaccgtgaaagtgaattatcactttccaccaaaatgacggtcaaattatgagtcgatgtctcaatgttgctactgagctgcacatagcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgcagagccagaggaattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-10 False 72 mRNA 0.56 1 33049349 33049420
TU905384 True 612 lncRNA 0.45 2 33046280 33049435

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-9 NA coding upstream 1198 33048080 ~ 33048151 (+)
trnag-ucc-8 NA coding upstream 2467 33046811 ~ 33046882 (+)
trnag-ucc-7 NA coding upstream 5275 33044003 ~ 33044074 (+)
trnag-ucc-6 NA coding upstream 6686 33042592 ~ 33042663 (+)
trnag-ucc-4 NA coding upstream 13827 33035451 ~ 33035522 (+)
trnag-ucc-11 NA coding downstream 1340 33050760 ~ 33050831 (+)
trnag-ucc-12 NA coding downstream 2751 33052171 ~ 33052242 (+)
trnag-ucc-13 NA coding downstream 4162 33053582 ~ 33053653 (+)
trnag-ucc-14 NA coding downstream 5573 33054993 ~ 33055064 (+)
trnag-ucc-15 NA coding downstream 10269 33059689 ~ 33059760 (+)
G795141 NA non-coding upstream 20168 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 86978 32960420 ~ 32962371 (+)
G795016 NA non-coding upstream 220222 32751174 ~ 32829127 (+)
G795010 NA non-coding upstream 310286 32738405 ~ 32739063 (+)
G795002 NA non-coding upstream 323070 32725966 ~ 32726279 (+)
G795437 NA non-coding downstream 56829 33106249 ~ 33106723 (+)
G795438 NA non-coding downstream 66787 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 93961 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 138928 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 181655 33231075 ~ 33232779 (+)
G794886 LOC106577459 other upstream 461961 32583606 ~ 32587388 (+)
G794893 NA other upstream 546600 32502396 ~ 32502749 (+)
G794892 NA other upstream 546994 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 924498 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1292904 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1072002 34121422 ~ 34121740 (+)
G797056 NA other downstream 1506511 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2315568 35364988 ~ 35372148 (+)
G799053 NA other downstream 3263709 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3984998 37034418 ~ 37035918 (+)
trnag-ucc-3 NA coding upstream 11264 33032239 ~ 33061120 (+)
ostc ostc coding upstream 506629 32520078 ~ 32539651 (+)

Expression


Co-expression Network