trnap-agg-22



Basic Information


Item Value
gene id trnap-agg-22
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33053941 ~ 33054012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnap-agg-22
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnap-agg-22 True 72 mRNA 0.60 1 33053941 33054012

Neighbor


gene id symbol gene type direction distance location
trnap-agg-21 NA coding downstream 1340 33052530 ~ 33052601 (-)
trnap-agg-20 NA coding downstream 2751 33051119 ~ 33051190 (-)
trnap-agg-19 NA coding downstream 4162 33049708 ~ 33049779 (-)
trnap-agg-18 NA coding downstream 9508 33044362 ~ 33044433 (-)
trnap-agg-17 NA coding downstream 10919 33042951 ~ 33043022 (-)
trnap-agg-23 NA coding upstream 1340 33055352 ~ 33055423 (-)
trnap-agg-24 NA coding upstream 8561 33062573 ~ 33062644 (-)
trnap-agg-25 NA coding upstream 15025 33069037 ~ 33069108 (-)
trnap-agg-26 NA coding upstream 16436 33070448 ~ 33070519 (-)
trnap-agg-27 NA coding upstream 17847 33071859 ~ 33071930 (-)
G795449 NA non-coding downstream 19186 33032351 ~ 33034755 (-)
G795420 NA non-coding downstream 24758 32971460 ~ 33029183 (-)
G795421 NA non-coding downstream 45577 32993891 ~ 33008364 (-)
G795267 NA non-coding downstream 325548 32728155 ~ 32728393 (-)
G795266 NA non-coding downstream 326112 32727581 ~ 32727829 (-)
G795448 NA non-coding upstream 9158 33063170 ~ 33068719 (-)
G795461 NA non-coding upstream 42138 33096150 ~ 33098013 (-)
G795464 NA non-coding upstream 62193 33116205 ~ 33123267 (-)
G795474 NA non-coding upstream 181948 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 194230 33248242 ~ 33251310 (-)
G794311 LOC106577443 other downstream 1025673 32026071 ~ 32028445 (-)
G793842 NA other downstream 1391743 31661239 ~ 31662198 (-)
G793489 NA other downstream 1634968 31418455 ~ 31418973 (-)
G793472 NA other downstream 1650072 31403482 ~ 31403869 (-)
G792267 NA other downstream 2695977 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 997047 34051059 ~ 34057549 (-)
G797605 NA other upstream 1815943 34869955 ~ 34875879 (-)
G798195 NA other upstream 2300207 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2331841 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2438014 35492026 ~ 35521884 (-)

Expression



Co-expression Network