trnag-ucc-18



Basic Information


Item Value
gene id trnag-ucc-18
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33061204 ~ 33061275 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-18
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccgatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-18 True 72 mRNA 0.54 1 33061204 33061275

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-17 NA coding upstream 434 33060699 ~ 33060770 (+)
trnag-ucc-16 NA coding upstream 939 33060194 ~ 33060265 (+)
trnag-ucc-15 NA coding upstream 1444 33059689 ~ 33059760 (+)
trnag-ucc-14 NA coding upstream 6140 33054993 ~ 33055064 (+)
trnag-ucc-13 NA coding upstream 7551 33053582 ~ 33053653 (+)
trnag-ucc-19 NA coding downstream 434 33029550 ~ 33066274 (+)
trnag-ucc-20 NA coding downstream 939 33062214 ~ 33062285 (+)
trnag-ucc-21 NA coding downstream 3609 33064884 ~ 33064955 (+)
trnag-ucc-22 NA coding downstream 4114 33065389 ~ 33065460 (+)
trnag-ucc-23 NA coding downstream 4619 33065894 ~ 33065965 (+)
trnag-ucc-3 NA non-coding upstream 84 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 11769 33046280 ~ 33049435 (+)
G795141 NA non-coding upstream 32023 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 98833 32960420 ~ 32962371 (+)
G795016 NA non-coding upstream 232077 32751174 ~ 32829127 (+)
G795437 NA non-coding downstream 44974 33106249 ~ 33106723 (+)
G795438 NA non-coding downstream 54932 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 82106 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 127073 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 169800 33231075 ~ 33232779 (+)
G794886 LOC106577459 other upstream 473816 32583606 ~ 32587388 (+)
G794893 NA other upstream 558455 32502396 ~ 32502749 (+)
G794892 NA other upstream 558849 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 936353 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1304759 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1060147 34121422 ~ 34121740 (+)
G797056 NA other downstream 1494656 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2303713 35364988 ~ 35372148 (+)
G799053 NA other downstream 3251854 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3973143 37034418 ~ 37035918 (+)

Expression



Co-expression Network