trnag-ucc-20



Basic Information


Item Value
gene id trnag-ucc-20
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33062214 ~ 33062285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-20
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-20 True 72 mRNA 0.56 1 33062214 33062285

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-19 NA coding upstream 434 33029550 ~ 33066274 (+)
trnag-ucc-18 NA coding upstream 939 33061204 ~ 33061275 (+)
trnag-ucc-17 NA coding upstream 1444 33060699 ~ 33060770 (+)
trnag-ucc-16 NA coding upstream 1949 33060194 ~ 33060265 (+)
trnag-ucc-15 NA coding upstream 2454 33059689 ~ 33059760 (+)
trnag-ucc-21 NA coding downstream 2599 33064884 ~ 33064955 (+)
trnag-ucc-22 NA coding downstream 3104 33065389 ~ 33065460 (+)
trnag-ucc-23 NA coding downstream 3609 33065894 ~ 33065965 (+)
trnag-ucc-24 NA coding downstream 4114 33066399 ~ 33066470 (+)
trnag-ucc-25 NA coding downstream 4619 33066904 ~ 33066975 (+)
trnag-ucc-3 NA non-coding upstream 1094 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 12779 33046280 ~ 33049435 (+)
G795141 NA non-coding upstream 33033 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 99843 32960420 ~ 32962371 (+)
G795016 NA non-coding upstream 233087 32751174 ~ 32829127 (+)
G795437 NA non-coding downstream 43964 33106249 ~ 33106723 (+)
G795438 NA non-coding downstream 53922 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 81096 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 126063 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 168790 33231075 ~ 33232779 (+)
G794886 LOC106577459 other upstream 474826 32583606 ~ 32587388 (+)
G794893 NA other upstream 559465 32502396 ~ 32502749 (+)
G794892 NA other upstream 559859 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 937363 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1305769 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1059137 34121422 ~ 34121740 (+)
G797056 NA other downstream 1493646 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2302703 35364988 ~ 35372148 (+)
G799053 NA other downstream 3250844 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3972133 37034418 ~ 37035918 (+)

Expression



Co-expression Network