trnap-agg-25



Basic Information


Item Value
gene id trnap-agg-25
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33069037 ~ 33069108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnap-agg-25
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnap-agg-25 True 72 mRNA 0.60 1 33069037 33069108

Neighbor


gene id symbol gene type direction distance location
trnap-agg-24 NA coding downstream 6393 33062573 ~ 33062644 (-)
trnap-agg-23 NA coding downstream 13614 33055352 ~ 33055423 (-)
trnap-agg-22 NA coding downstream 15025 33053941 ~ 33054012 (-)
trnap-agg-21 NA coding downstream 16436 33052530 ~ 33052601 (-)
trnap-agg-20 NA coding downstream 17847 33051119 ~ 33051190 (-)
trnap-agg-26 NA coding upstream 1340 33070448 ~ 33070519 (-)
trnap-agg-27 NA coding upstream 2751 33071859 ~ 33071930 (-)
trnap-agg-28 NA coding upstream 4162 33073270 ~ 33073341 (-)
trnap-agg-29 NA coding upstream 5573 33074681 ~ 33074752 (-)
trnap-agg-30 NA coding upstream 6985 33076093 ~ 33076164 (-)
G795448 NA non-coding downstream 318 33063170 ~ 33068719 (-)
G795456 NA non-coding downstream 2552 33046280 ~ 33066485 (-)
G795449 NA non-coding downstream 34282 33032351 ~ 33034755 (-)
G795420 NA non-coding downstream 39854 32971460 ~ 33029183 (-)
G795421 NA non-coding downstream 60673 32993891 ~ 33008364 (-)
G795461 NA non-coding upstream 27042 33096150 ~ 33098013 (-)
G795464 NA non-coding upstream 47097 33116205 ~ 33123267 (-)
G795474 NA non-coding upstream 166852 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 179134 33248242 ~ 33251310 (-)
LOC110531942 LOC106571840 non-coding upstream 214783 33283869 ~ 33318989 (-)
G794311 LOC106577443 other downstream 1040769 32026071 ~ 32028445 (-)
G793842 NA other downstream 1406839 31661239 ~ 31662198 (-)
G793489 NA other downstream 1650064 31418455 ~ 31418973 (-)
G793472 NA other downstream 1665168 31403482 ~ 31403869 (-)
G792267 NA other downstream 2711073 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 981951 34051059 ~ 34057549 (-)
G797605 NA other upstream 1800847 34869955 ~ 34875879 (-)
G798195 NA other upstream 2285111 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2316745 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2422918 35492026 ~ 35521884 (-)

Expression



Co-expression Network