trnag-ucc-42



Basic Information


Item Value
gene id trnag-ucc-42
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33088717 ~ 33088788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-42
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-42 True 72 mRNA 0.56 1 33088717 33088788

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-41 NA coding upstream 1199 33087447 ~ 33087518 (+)
trnag-ucc-40 NA coding upstream 2469 33086177 ~ 33086248 (+)
trnag-ucc-39 NA coding upstream 3739 33084907 ~ 33084978 (+)
trnag-ucc-38 NA coding upstream 5009 33083637 ~ 33083708 (+)
trnag-ucc-37 NA coding upstream 6279 33082367 ~ 33082438 (+)
trnag-ucc-43 NA coding downstream 1199 33089987 ~ 33090058 (+)
trnag-ucc-44 NA coding downstream 2469 33091257 ~ 33091328 (+)
trnag-ucc-45 NA coding downstream 3739 33092527 ~ 33092598 (+)
trnag-ucc-46 NA coding downstream 21589 33110377 ~ 33110448 (+)
trnag-ucc-47 NA coding downstream 25819 33114607 ~ 33114678 (+)
trnag-ucc-19 NA non-coding upstream 22443 33029550 ~ 33066274 (+)
trnag-ucc-3 NA non-coding upstream 27597 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 39282 33046280 ~ 33049435 (+)
G795141 NA non-coding upstream 59536 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 126346 32960420 ~ 32962371 (+)
G795437 NA non-coding downstream 17461 33106249 ~ 33106723 (+)
G795438 NA non-coding downstream 27419 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 54593 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 99560 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 142287 33231075 ~ 33232779 (+)
G794886 LOC106577459 other upstream 501329 32583606 ~ 32587388 (+)
G794893 NA other upstream 585968 32502396 ~ 32502749 (+)
G794892 NA other upstream 586362 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 963866 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1332272 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1032634 34121422 ~ 34121740 (+)
G797056 NA other downstream 1467143 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2276200 35364988 ~ 35372148 (+)
G799053 NA other downstream 3224341 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3945630 37034418 ~ 37035918 (+)

Expression



Co-expression Network