trnag-ucc-43


Basic Information

Item Value
gene id trnag-ucc-43
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33089987 ~ 33090058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-43
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-43 True 72 mRNA 0.56 1 33089987 33090058

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-42 NA coding upstream 1199 33088717 ~ 33088788 (+)
trnag-ucc-41 NA coding upstream 2469 33087447 ~ 33087518 (+)
trnag-ucc-40 NA coding upstream 3739 33086177 ~ 33086248 (+)
trnag-ucc-39 NA coding upstream 5009 33084907 ~ 33084978 (+)
trnag-ucc-38 NA coding upstream 6279 33083637 ~ 33083708 (+)
trnag-ucc-44 NA coding downstream 1199 33091257 ~ 33091328 (+)
trnag-ucc-45 NA coding downstream 2469 33092527 ~ 33092598 (+)
trnag-ucc-46 NA coding downstream 20319 33110377 ~ 33110448 (+)
trnag-ucc-47 NA coding downstream 24549 33114607 ~ 33114678 (+)
trnag-ucc-48 NA coding downstream 33235 33123293 ~ 33123364 (+)
trnag-ucc-19 NA non-coding upstream 23713 33029550 ~ 33066274 (+)
trnag-ucc-3 NA non-coding upstream 28867 33032239 ~ 33061120 (+)
trnag-ucc-10 NA non-coding upstream 40552 33046280 ~ 33049435 (+)
G795141 NA non-coding upstream 60806 32971724 ~ 33029181 (+)
G795146 NA non-coding upstream 127616 32960420 ~ 32962371 (+)
G795437 NA non-coding downstream 16191 33106249 ~ 33106723 (+)
G795438 NA non-coding downstream 26149 33116207 ~ 33123231 (+)
G795442 NA non-coding downstream 53323 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 98290 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 141017 33231075 ~ 33232779 (+)
G794886 LOC106577459 other upstream 502599 32583606 ~ 32587388 (+)
G794893 NA other upstream 587238 32502396 ~ 32502749 (+)
G794892 NA other upstream 587632 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 965136 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1333542 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 1031364 34121422 ~ 34121740 (+)
G797056 NA other downstream 1465873 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2274930 35364988 ~ 35372148 (+)
G799053 NA other downstream 3223071 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3944360 37034418 ~ 37035918 (+)

Expression


Co-expression Network