trnag-ucc-54


Basic Information

Item Value
gene id trnag-ucc-54
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33131527 ~ 33131598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-54
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-54 True 72 mRNA 0.56 1 33131527 33131598

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-53 NA coding upstream 1322 33130134 ~ 33130205 (+)
trnag-ucc-52 NA coding upstream 2715 33128741 ~ 33128812 (+)
trnag-ucc-51 NA coding upstream 4108 33127348 ~ 33127419 (+)
trnag-ucc-50 NA coding upstream 5501 33125955 ~ 33126026 (+)
trnag-ucc-49 NA coding upstream 6894 33124562 ~ 33124633 (+)
trnag-ucc-55 NA coding downstream 1322 33132920 ~ 33132991 (+)
trnag-ucc-56 NA coding downstream 2591 33134189 ~ 33134260 (+)
trnag-ucc-57 NA coding downstream 3860 33135458 ~ 33135529 (+)
trnag-ucc-58 NA coding downstream 5129 33136727 ~ 33136798 (+)
trnag-ucc-59 NA coding downstream 6147 33137745 ~ 33137816 (+)
G795438 NA non-coding upstream 8296 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 24804 33106249 ~ 33106723 (+)
trnag-ucc-19 NA non-coding upstream 65253 33029550 ~ 33066274 (+)
G795442 NA non-coding downstream 11783 33143381 ~ 33143673 (+)
G795445 NA non-coding downstream 56750 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 99477 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 119423 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 190605 33322203 ~ 33322608 (+)
G794886 LOC106577459 other upstream 544139 32583606 ~ 32587388 (+)
G794893 NA other upstream 628778 32502396 ~ 32502749 (+)
G794892 NA other upstream 629172 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1006676 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1375082 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 989824 34121422 ~ 34121740 (+)
G797056 NA other downstream 1424333 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2233390 35364988 ~ 35372148 (+)
G799053 NA other downstream 3181531 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3902820 37034418 ~ 37035918 (+)

Expression


Co-expression Network