trnap-agg-39


Basic Information

Item Value
gene id trnap-agg-39
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33151470 ~ 33151541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-39
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-39 True 72 mRNA 0.47 1 33151470 33151541

Neighbor

gene id symbol gene type direction distance location
trnap-agg-38 NA coding downstream 7939 33143460 ~ 33143531 (-)
trnap-agg-37 NA coding downstream 9348 33142051 ~ 33142122 (-)
trnap-agg-36 NA coding downstream 13295 33138104 ~ 33138175 (-)
trnap-agg-35 NA coding downstream 36433 33114966 ~ 33115037 (-)
trnap-agg-34 NA coding downstream 37842 33113557 ~ 33113628 (-)
trnap-agg-40 NA coding upstream 3876 33155417 ~ 33155488 (-)
trnap-agg-41 NA coding upstream 19388 33170929 ~ 33171000 (-)
trnap-agg-42 NA coding upstream 24603 33176144 ~ 33176215 (-)
trnap-agg-43 NA coding upstream 28550 33180091 ~ 33180162 (-)
trnap-agg-44 NA coding upstream 29959 33181500 ~ 33181571 (-)
G795464 NA non-coding downstream 28203 33116205 ~ 33123267 (-)
G795461 NA non-coding downstream 53457 33096150 ~ 33098013 (-)
G795448 NA non-coding downstream 82751 33063170 ~ 33068719 (-)
G795456 NA non-coding downstream 84985 33046280 ~ 33066485 (-)
G795449 NA non-coding downstream 116715 33032351 ~ 33034755 (-)
G795474 NA non-coding upstream 84419 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 96701 33248242 ~ 33251310 (-)
LOC110531942 LOC106571840 non-coding upstream 132350 33283869 ~ 33318989 (-)
G795591 LOC106568774 non-coding upstream 183760 33335301 ~ 33335636 (-)
G795592 LOC106600668 non-coding upstream 184533 33336074 ~ 33336483 (-)
G794311 LOC106577443 other downstream 1123202 32026071 ~ 32028445 (-)
G793842 NA other downstream 1489272 31661239 ~ 31662198 (-)
G793489 NA other downstream 1732497 31418455 ~ 31418973 (-)
G793472 NA other downstream 1747601 31403482 ~ 31403869 (-)
G792267 NA other downstream 2793506 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 899518 34051059 ~ 34057549 (-)
G797605 NA other upstream 1718414 34869955 ~ 34875879 (-)
G798195 NA other upstream 2202678 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2234312 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2340485 35492026 ~ 35521884 (-)

Expression


Co-expression Network