trnag-ucc-78


Basic Information

Item Value
gene id trnag-ucc-78
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33165354 ~ 33165425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-78
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-78 True 72 mRNA 0.56 1 33165354 33165425

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-77 NA coding upstream 1199 33164084 ~ 33164155 (+)
trnag-ucc-76 NA coding upstream 2468 33162815 ~ 33162886 (+)
trnag-ucc-75 NA coding upstream 3738 33161545 ~ 33161616 (+)
trnag-ucc-74 NA coding upstream 5007 33160276 ~ 33160347 (+)
trnag-ucc-73 NA coding upstream 6277 33159006 ~ 33159077 (+)
trnag-ucc-79 NA coding downstream 1198 33166623 ~ 33166694 (+)
trnag-ucc-80 NA coding downstream 3876 33169301 ~ 33169372 (+)
trnag-ucc-81 NA coding downstream 5145 33170570 ~ 33170641 (+)
trnag-ucc-82 NA coding downstream 6554 33171979 ~ 33172050 (+)
trnag-ucc-83 NA coding downstream 7821 33173246 ~ 33173317 (+)
G795442 NA non-coding upstream 21681 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 42123 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 58631 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 104234 33032239 ~ 33061120 (+)
G795445 NA non-coding downstream 22923 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 65650 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 85596 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 156778 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 157926 33323351 ~ 33323846 (+)
G794886 LOC106577459 other upstream 577966 32583606 ~ 32587388 (+)
G794893 NA other upstream 662605 32502396 ~ 32502749 (+)
G794892 NA other upstream 662999 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1040503 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1408909 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 955997 34121422 ~ 34121740 (+)
G797056 NA other downstream 1390506 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2199563 35364988 ~ 35372148 (+)
G799053 NA other downstream 3147704 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3868993 37034418 ~ 37035918 (+)

Expression


Co-expression Network