trnag-ucc-80



Basic Information


Item Value
gene id trnag-ucc-80
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33169301 ~ 33169372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-80
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-80 True 72 mRNA 0.56 1 33169301 33169372

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-79 NA coding upstream 2607 33166623 ~ 33166694 (+)
trnag-ucc-78 NA coding upstream 3876 33165354 ~ 33165425 (+)
trnag-ucc-77 NA coding upstream 5146 33164084 ~ 33164155 (+)
trnag-ucc-76 NA coding upstream 6415 33162815 ~ 33162886 (+)
trnag-ucc-75 NA coding upstream 7685 33161545 ~ 33161616 (+)
trnag-ucc-81 NA coding downstream 1198 33170570 ~ 33170641 (+)
trnag-ucc-82 NA coding downstream 2607 33171979 ~ 33172050 (+)
trnag-ucc-83 NA coding downstream 3874 33173246 ~ 33173317 (+)
trnag-ucc-84 NA coding downstream 5144 33174516 ~ 33174587 (+)
trnag-ucc-85 NA coding downstream 6413 33175785 ~ 33175856 (+)
G795442 NA non-coding upstream 25628 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 46070 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 62578 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 108181 33032239 ~ 33061120 (+)
G795445 NA non-coding downstream 18976 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 61703 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 81649 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 152831 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 153979 33323351 ~ 33323846 (+)
G794886 LOC106577459 other upstream 581913 32583606 ~ 32587388 (+)
G794893 NA other upstream 666552 32502396 ~ 32502749 (+)
G794892 NA other upstream 666946 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1044450 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1412856 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 952050 34121422 ~ 34121740 (+)
G797056 NA other downstream 1386559 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2195616 35364988 ~ 35372148 (+)
G799053 NA other downstream 3143757 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3865046 37034418 ~ 37035918 (+)

Expression



Co-expression Network