trnag-ucc-88


Basic Information

Item Value
gene id trnag-ucc-88
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33179732 ~ 33179803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-88
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-88 True 72 mRNA 0.56 1 33179732 33179803

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-87 NA coding upstream 1198 33178463 ~ 33178534 (+)
trnag-ucc-86 NA coding upstream 2467 33177194 ~ 33177265 (+)
trnag-ucc-85 NA coding upstream 3876 33175785 ~ 33175856 (+)
trnag-ucc-84 NA coding upstream 5145 33174516 ~ 33174587 (+)
trnag-ucc-83 NA coding upstream 6415 33173246 ~ 33173317 (+)
trnag-ucc-89 NA coding downstream 1338 33181141 ~ 33181212 (+)
trnag-ucc-90 NA coding downstream 4158 33183961 ~ 33184032 (+)
trnag-ucc-91 NA coding downstream 5427 33185230 ~ 33185301 (+)
trnag-ucc-92 NA coding downstream 6696 33186499 ~ 33186570 (+)
trnag-ucc-93 NA coding downstream 7965 33187768 ~ 33187839 (+)
G795442 NA non-coding upstream 36059 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 56501 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 73009 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 118612 33032239 ~ 33061120 (+)
G795445 NA non-coding downstream 8545 33188348 ~ 33233498 (+)
G795447 NA non-coding downstream 51272 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 71218 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 142400 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 143548 33323351 ~ 33323846 (+)
G794886 LOC106577459 other upstream 592344 32583606 ~ 32587388 (+)
G794893 NA other upstream 676983 32502396 ~ 32502749 (+)
G794892 NA other upstream 677377 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1054881 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1423287 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 941619 34121422 ~ 34121740 (+)
G797056 NA other downstream 1376128 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2185185 35364988 ~ 35372148 (+)
G799053 NA other downstream 3133326 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3854615 37034418 ~ 37035918 (+)

Expression


Co-expression Network