trnap-agg-44


Basic Information

Item Value
gene id trnap-agg-44
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33181500 ~ 33181571 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-44
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-44 True 72 mRNA 0.60 1 33181500 33181571

Neighbor

gene id symbol gene type direction distance location
trnap-agg-43 NA coding downstream 1338 33180091 ~ 33180162 (-)
trnap-agg-42 NA coding downstream 5285 33176144 ~ 33176215 (-)
trnap-agg-41 NA coding downstream 10500 33170929 ~ 33171000 (-)
trnap-agg-40 NA coding downstream 26012 33155417 ~ 33155488 (-)
trnap-agg-39 NA coding downstream 29959 33151470 ~ 33151541 (-)
trnap-agg-45 NA coding upstream 16203 33197774 ~ 33197845 (-)
trnap-agg-46 NA coding upstream 17613 33199184 ~ 33199255 (-)
trnap-agg-47 NA coding upstream 19023 33200594 ~ 33200665 (-)
trnap-agg-48 NA coding upstream 21703 33203274 ~ 33203345 (-)
trnap-agg-49 NA coding upstream 26921 33208492 ~ 33208563 (-)
G795464 NA non-coding downstream 58233 33116205 ~ 33123267 (-)
G795461 NA non-coding downstream 83487 33096150 ~ 33098013 (-)
G795448 NA non-coding downstream 112781 33063170 ~ 33068719 (-)
G795456 NA non-coding downstream 115015 33046280 ~ 33066485 (-)
G795449 NA non-coding downstream 146745 33032351 ~ 33034755 (-)
G795474 NA non-coding upstream 54389 33235960 ~ 33236337 (-)
G795522 NA non-coding upstream 66671 33248242 ~ 33251310 (-)
LOC110531942 LOC106571840 non-coding upstream 102320 33283869 ~ 33318989 (-)
G795591 LOC106568774 non-coding upstream 153730 33335301 ~ 33335636 (-)
G795592 LOC106600668 non-coding upstream 154503 33336074 ~ 33336483 (-)
G794311 LOC106577443 other downstream 1153232 32026071 ~ 32028445 (-)
G793842 NA other downstream 1519302 31661239 ~ 31662198 (-)
G793489 NA other downstream 1762527 31418455 ~ 31418973 (-)
G793472 NA other downstream 1777631 31403482 ~ 31403869 (-)
G792267 NA other downstream 2823536 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 869488 34051059 ~ 34057549 (-)
G797605 NA other upstream 1688384 34869955 ~ 34875879 (-)
G798195 NA other upstream 2172648 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 2204282 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 2310455 35492026 ~ 35521884 (-)

Expression


Co-expression Network