trnag-ucc-109


Basic Information

Item Value
gene id trnag-ucc-109
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33208133 ~ 33208204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-109
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-109 True 72 mRNA 0.56 1 33208133 33208204

Neighbor

gene id symbol gene type direction distance location
trnag-ucc-108 NA coding upstream 1198 33206864 ~ 33206935 (+)
trnag-ucc-107 NA coding upstream 2467 33205595 ~ 33205666 (+)
trnag-ucc-106 NA coding upstream 3736 33204326 ~ 33204397 (+)
trnag-ucc-105 NA coding upstream 5147 33202915 ~ 33202986 (+)
trnag-ucc-104 NA coding upstream 6416 33201646 ~ 33201717 (+)
trnag-ucc-110 NA coding downstream 1340 33209544 ~ 33209615 (+)
trnag-ucc-111 NA coding downstream 2751 33210955 ~ 33211026 (+)
trnag-ucc-112 NA coding downstream 3485 33211689 ~ 33211760 (+)
trnag-ucc-113 NA coding downstream 4894 33213098 ~ 33213169 (+)
trnag-ucc-114 NA coding downstream 6219 33214423 ~ 33214494 (+)
G795442 NA non-coding upstream 64460 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 84902 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 101410 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 147013 33032239 ~ 33061120 (+)
G795447 NA non-coding downstream 22871 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 42817 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 113999 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 115147 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 119911 33328115 ~ 33328354 (+)
G794886 LOC106577459 other upstream 620745 32583606 ~ 32587388 (+)
G794893 NA other upstream 705384 32502396 ~ 32502749 (+)
G794892 NA other upstream 705778 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1083282 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1451688 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 913218 34121422 ~ 34121740 (+)
G797056 NA other downstream 1347727 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2156784 35364988 ~ 35372148 (+)
G799053 NA other downstream 3104925 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3826214 37034418 ~ 37035918 (+)

Expression


Co-expression Network