trnag-ucc-117



Basic Information


Item Value
gene id trnag-ucc-117
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33218398 ~ 33218469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-117
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacctgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-117 True 72 mRNA 0.54 1 33218398 33218469

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-116 NA coding upstream 1254 33217073 ~ 33217144 (+)
trnag-ucc-115 NA coding upstream 2579 33215748 ~ 33215819 (+)
trnag-ucc-114 NA coding upstream 3904 33214423 ~ 33214494 (+)
trnag-ucc-113 NA coding upstream 5229 33213098 ~ 33213169 (+)
trnag-ucc-112 NA coding upstream 6638 33211689 ~ 33211760 (+)
trnag-ucc-118 NA coding downstream 1254 33219723 ~ 33219794 (+)
trnag-ucc-119 NA coding downstream 2930 33221399 ~ 33221470 (+)
trnag-ucc-120 NA coding downstream 6999 33225468 ~ 33225539 (+)
trnag-ucc-121 NA coding downstream 8408 33226877 ~ 33226948 (+)
trnag-ucc-122 NA coding downstream 9817 33228286 ~ 33228357 (+)
G795442 NA non-coding upstream 74725 33143381 ~ 33143673 (+)
G795438 NA non-coding upstream 95167 33116207 ~ 33123231 (+)
G795437 NA non-coding upstream 111675 33106249 ~ 33106723 (+)
trnag-ucc-3 NA non-coding upstream 157278 33032239 ~ 33061120 (+)
G795447 NA non-coding downstream 12606 33231075 ~ 33232779 (+)
G795477 NA non-coding downstream 32552 33251021 ~ 33316895 (+)
G795560 NA non-coding downstream 103734 33322203 ~ 33322608 (+)
G795564 NA non-coding downstream 104882 33323351 ~ 33323846 (+)
G795568 NA non-coding downstream 109646 33328115 ~ 33328354 (+)
G794886 LOC106577459 other upstream 631010 32583606 ~ 32587388 (+)
G794893 NA other upstream 715649 32502396 ~ 32502749 (+)
G794892 NA other upstream 716043 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1093547 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1461953 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 902953 34121422 ~ 34121740 (+)
G797056 NA other downstream 1337462 34555931 ~ 34556622 (+)
G797932 pphln other downstream 2146519 35364988 ~ 35372148 (+)
G799053 NA other downstream 3094660 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3815949 37034418 ~ 37035918 (+)

Expression



Co-expression Network