Item | Value |
---|---|
gene id | LOC110531942 |
gene name | LOC106571840 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 33283869 ~ 33318989 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
ubiquitin carboxyl-terminal hydrolase 11-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036987823.1 | False | 6565 | mRNA | 0.45 | 21 | 33283869 | 33318958 |
XM_036987825.1 | False | 6563 | mRNA | 0.45 | 21 | 33283869 | 33318959 |
XM_036987824.1 | False | 6445 | mRNA | 0.46 | 22 | 33283869 | 33318989 |
TU905520 | True | 4183 | lncRNA | 0.41 | 4 | 33283891 | 33290054 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
trnap-agg-56 | NA | coding | downstream | 50448 | 33233350 ~ 33233421 (-) |
trnap-agg-55 | NA | coding | downstream | 51094 | 33232704 ~ 33232775 (-) |
trnap-agg-54 | NA | coding | downstream | 52503 | 33231295 ~ 33231366 (-) |
trnap-agg-53 | NA | coding | downstream | 56562 | 33227236 ~ 33227307 (-) |
trnap-agg-52 | NA | coding | downstream | 57971 | 33225827 ~ 33225898 (-) |
LOC118966028 | NA | coding | upstream | 22862 | 33341652 ~ 33342845 (-) |
LOC110531946 | LOC106571846 | coding | upstream | 460459 | 33779448 ~ 33801499 (-) |
LOC110531948 | LOC106571850 | coding | upstream | 621446 | 33940435 ~ 33999008 (-) |
LOC110531949 | LOC106571850 | coding | upstream | 687963 | 34006952 ~ 34034490 (-) |
LOC110531953 | LOC106571856 | coding | upstream | 814581 | 34133570 ~ 34163176 (-) |
G795522 | NA | non-coding | downstream | 32559 | 33248242 ~ 33251310 (-) |
G795474 | NA | non-coding | downstream | 47532 | 33235960 ~ 33236337 (-) |
G795464 | NA | non-coding | downstream | 160602 | 33116205 ~ 33123267 (-) |
G795461 | NA | non-coding | downstream | 185856 | 33096150 ~ 33098013 (-) |
G795448 | NA | non-coding | downstream | 215150 | 33063170 ~ 33068719 (-) |
G795591 | LOC106568774 | non-coding | upstream | 16312 | 33335301 ~ 33335636 (-) |
G795592 | LOC106600668 | non-coding | upstream | 17085 | 33336074 ~ 33336483 (-) |
G795593 | LOC106568774 | non-coding | upstream | 18177 | 33337166 ~ 33337718 (-) |
G795605 | NA | non-coding | upstream | 38764 | 33357753 ~ 33357953 (-) |
G794311 | LOC106577443 | other | downstream | 1255601 | 32026071 ~ 32028445 (-) |
G793842 | NA | other | downstream | 1621671 | 31661239 ~ 31662198 (-) |
G793489 | NA | other | downstream | 1864896 | 31418455 ~ 31418973 (-) |
G793472 | NA | other | downstream | 1880000 | 31403482 ~ 31403869 (-) |
G792267 | NA | other | downstream | 2925905 | 30315310 ~ 30357964 (-) |
G796733 | rl32 | other | upstream | 732070 | 34051059 ~ 34057549 (-) |
G797605 | NA | other | upstream | 1550966 | 34869955 ~ 34875879 (-) |
G798195 | NA | other | upstream | 2035230 | 35354219 ~ 35354675 (-) |
LOC110531966 | LOC106571884 | other | upstream | 2066864 | 35381661 ~ 35400349 (-) |
LOC118966032 | LOC106571870 | other | upstream | 2173037 | 35492026 ~ 35521884 (-) |