LOC110531945 (LOC106571845)


Basic Information

Item Value
gene id LOC110531945
gene name LOC106571845
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 33549171 ~ 33686031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615472.2
TGGCCATTTCAGATATTTGTTTCCACAAATGTATAATTAGGTGGGTGAGTGCGAGAGAGGGATTTGGGATTTCAACGGACCCCAGATGACTGCGTGAGGCAAAATGCTCAGTGCGCGCCGACGTCGATAATGTGAAGGCAGGAATGGATTAAACTTGTGGTCTACAATGTTTTGCCTTGACTGAATGTAGCCTAAAGACGACGCACTGACAGAGGATTTAAACACTTGCCCAAACCTCCTAAAGAGGACTTTCTACAGGTAGAATATTTGGAACCCATCTTGAAGTAGGTTAATTCACCTCGGGGTTTTTCAAGCAGATTGAATGACGCCTCTCAATGATAGCGGGTGAAAACTAATCGCGCGTGGTGAGTTATTCTGTGAGTCATTAATTTGTTTTAGGAATATACGATTTTTTTGCGGAGTAGAATACGATAAAGAAAGAAGGATAGCGTGTTTGCGTTTTTGTTCACTTCTATATGTCGATCCAACGATCGTAGTTTTATTCGTGGAGATTTTTAGTGATGTTATAGACAGACTCCTGGTCGACCGAGACGCAGCAGGCAGATCATAGCGGACACGCCAGATCCGTCACTGCGCTCATGTGAAGTTGGCCTCGGCAAAAAGAATGTCACCCAGTTCTGCTGGACCTAAGATCAAAtagcattttttttaaaaggcTGTTCGATCTTGTCGATCTATTAGTTCTGTGAAATACATTTTACCGTATGCCTTTTCCTCAGATTGTTATGATCAGACCCCTTTTACTTTTAATGTGATAGGTGTTGCTTTGGTTAGCCTACAGTAATAAATAGTTTTGTGACAGTGGAACCCTTGCGTAAAGTCTATATTATTGATGTTTTCTCAGACAAATTATGTCAATTGCCTCGTTAACCTGAGCAATTTTGAATCCTCGTCAAATGGTGTTTTTCGATTCAACAAGCTACGCCAAGCACTCCTGGCAGTCAAGTGATGGGCGCAGTTTGCCTTAGTTGGAACCGAAGGCGTCTCGATTTTTTTTCATCCAGCTTGTTGAATCTCCTCCTTGGTGATAGGAATTGGCTCGTATTAACTCACTTTACTGCCATTTAGGTAGTAATATAGGCGGATTGCAGCCTCCCCTTTCGCTAGAACTAACTCAACCGTCGGAGCATCATGGCTCGTTACGCTCTCGGAACAAAGCAACACCCTCGCTTTCTATGGAGAGTGTTTTGGTTGACGAGAACGTTGGTGGATTTTGCGCTGTCGCAAGAGGTTTACGCACCCCATTCTATCCGGATTGAGGGACATTTGACCCTCGGTGGCCTCTTCCCTGTGCACACCAGAGGGACCGAAAGCACGCCTTGTGGAGATATCAAAAAGGAGAACGGGATCCATCGGCTGGAGGCCATGCTGTATGCTCTGGATCAAATTAACCTCGACGATCAACTTTTACCCAACATCACCCTAGGCGCCCGGGTGCTAGACACTTGTTCGAGGGATACATATGCGCTTGAACAATCATTAACTTTCGTTCAGGCATTGATACAGAAGGACACTTCAGATGTGAGGTGCACCAATGGAGAACCGCCCGTGTTCGTCAAGCCCGAGAAAGTGGTTGGAGTCGTTGGAGCCTCGGCAAGTTCCGTATCGATTATGGTCGCCAACATTTTGCGCCTCTTTCAGATCCCTCAGATCAGCTACGCCTCCACGGCCCCGGAGCTGAGTGATGACAGGCGCTATGACTTCTTCTCTCGGGTGGTTCCTCCAGACTCATTCCAAGTCCAAGCCATGGTGGACATCATCAGAGCCCTGGGCTGGACCTATGTGTCCACCGTGGCCTCTGAGGGCAGCTACGGAGAGAAGGGTGTGGAAACCTTCCAACAGATCTCCAAGGAGGCTGGTGGGATCTGCATCGCACAGTCTTTAAAAATTCCCCAAAACCCCAAGCTAGAGGATTATGACAAAGCCATCCAACATCTGCTGGATATGCACCACTCCCGGGCAGTCATCATCTTTGCCAGTGAAGAAGACATACGGGGAGTTCTCAATGCCACCAGGAGAGCCAATCAGGTGGGCCATTTCCTGTGGATTGGATCGGACAGTTGGGGGTCGAAGAGCAGCCCAATACACCAGTTAGAGGACGTGGCTGTGGGAGCAGTCACTATACTGCCCAAACGCTCATCTAttaaagGGTTTGATGAATACTTCACCTCGCTCACCCTGGAGAATAATCGCAGAAATGTGTGGTTCGCCGAATTCTGGGAGGAAAATTTTGACTGCAGGCTCCTCAGCTCCTCCAAACGAGAGGACACCAGCAGGAAATGCACAGgccAGGAGAGGATCGGGATAGACTCCAAGTATGAGCAGGAGGGGAAGGTTCAGTTTGTAATAGATGCTGTGTATGCCATGGCTTATGCCCTCCACAATATACAGAGAGACCTGTGTCCAGAGCACTCTGGCATTTGCCCTGGGATGGAGGCAGCCGAGGGGAAGACCCTGCTCAAGTATATACGCAACGTCAGCTTCAACGGTAGTGCAGGCACGTCGGTTATGTTTAATAAAAACGGTGACGCCCCGGGACGCTACGACCTGTTCCAGTTCCAGATGACCAACTCCAGTGTTCCTGAATACAGGCCCATCGGACAGTGGGTGGAGACACTCCAACTCAGGctcgAGGAGATGCAGTGGCCAGTAGGGGAGCCGGGTGTCCCTATCTCTGTGTGCAGTCTGCCCTGTAAGACAGgtgagaggaagaagagggtaAAGGGCATGCCATGCTGCTGGCACTGTGAGCTGTGTGATGGCTACCAGTACCAATACGATGAGACCTTGTGCCGCTTGTGCTCCTACGACATGAGGCCTGACCCAAACCGGACAACCTGCCAACCTATCCCCATCGTCAAGCTGGAGTGGCACTCCCCCTGGGCAGTCATTCCCGTCTTCCTTGCCATGCTGGGCATCATCGCCACCATCTTCGTCATGGCAACGTTCGTACGCTACAATGACACACCTATTGTGCGGGCATCGGGCCGCGAGCTGAGCTATGTGCTGCTGACGGGCATATTCCTGTGCTACATCATCACCTTCCTGATGATCGCCAAGCCCGATGTGGGCGTGTGCTCCTTCCGGAGAATCTTCTTGGGCCTGGGGATGAGCATCAGCTACGCCGCACTGCTCACCAAGACCAACCGCATCTACCGGATCTTTGAGCAGGGCAAGCAGACGGTGACCGCCCCACGTTTCATCAGCCCCACCTCCCAGATCGCTAtcacctcctccctcatctgcCTGCAGCTGCTGGGCGTGCTCATCTGGTTCGCCGTGGACCCGCCCAACACAGTCATCGACTACGACGAGCAAAAGACCATGAACCCCAACCTGGCGCGAGGCGTGCTGAAGTGTGACATCACGGACCTGCAGATGATCTGTTCGCTGGGCTACAGCATCCTTCTGATGGTCACATGTACCATCTATGCCATCAAAACCCGGGACGTGCCAGAGGACTTCAACGAGGCCAAGCCCATCGGCTTCACCATGTACACCACATGTATTGTGTGGCTGGCCTTCATCCCCATCTTCTTTGGCACGGCCCAATCTGCAGAGAAGCTGTACATCCAGACGACTACCCTCACCATCTCTATGAACCTCAGTGCCTCTGTAGCTCTCGGGATGCTCTACATGCCCAAGGTATATGTCATCATCTTCCACCCAGAGCTTAACGtgcagaagaggaagaggagcttCAAGGCTGTGGTCACTGCCGCCACCATGTCCTCCCGTCTCTCTGTGAAGCCCAGCGAGAGGCCCAATGGAGAGGCCAAATCTGAGCTGTGTGAAAACCCACCCACCGACCCCATGAGTCAAGCTACGAAGAAAACATATGTGAGTTACAACAACCTCAGGATCTGATGGGTTCCCGGGGAATTCTCCATGTCCTTACTCTGTGATGATGACCAAGACTAGGGATCACAGGAAGAGAATACCGGGACAGGGACACTACCTACCTATGCACTCCAGGACTGTGGTTGGTGTCAACCTTCATCATTTGTGTCTTctgaagaggaggatggcaggggGAAAGGGAAAACGGAGGGATGGAGATATTTGACATCAGGAGTGAATGAATGATGAAGATACAAACACAGCTGTAAGATGGTAACTTGGCCCTGGTCCGTTCTGTTCTAGAACCAGACCCTGGAACCTCTCTGTAGGGTTTTCCGTTAACAGTGAGTGAACAACCTCTGTGATACAGGTGTCGCTGAAAAAAATATGTCTGAACAGTTTATTTCAACAGTTTTCAAATAATTTTTTTGCAATATCCATTAAAGTCATATTCTCTTGCAGTGCTCATGGTTTGTTTTTAAGTTAAGTGAGGTTTCTTCTTAGTTCCTTGTGCCTGATCTTTCATTTTTTCTGACATAACATTATGTTGAATTTTGATTGAATAACTTTAATTAGCAAGCTCCGTcacatgcattttgttttatgaAATCAACTCAAATCAGCTATTTTAACACAAATAACTATGTCAGAGTGACGGGCAATGtatctatatttttttgtaaatatctGAGAGTATTTTCGTGTTTGgatgacaacaaaaaaatatatccaGTCTATGTTTGATTGGCTTTGGATGGTAAGGAAAAAGCAGCACAAAGTGTTCACATTGcatgtgccaatgtttgtcttttctatttggtgtaaaaaaaaaaaagatacattCATTCTCAAAATGACTATGATGTTAACCATCATTCTGccgtttattcatttattttaaataaattacCTGATTCACAAGAGAATATGGCTTTAATCTGTTATTAAAATGGACCCCTCTGCATCTGCAAGCATGTTTGATTTATATAGTTTTGTACAGAGTACATTGTGTTTAATTATCAATGGTGTGGGGCAAAAAAACATTAATATTGAAACATTCATGCAAGTATGCTGTGATGTTGTCTGTCCAATTATCAACATGTAATAAAATAATTTTGTTATCTTTTATACACTCAAACAA

Function

NR:

description
metabotropic glutamate receptor 7-like isoform X1

GO: NA

KEGG:

id description
K04609 GRM7; metabotropic glutamate receptor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615472.2 True 5002 mRNA 0.47 10 33549171 33686031

Neighbor

gene id symbol gene type direction distance location
LOC110531943 LOC106571843 coding upstream 161205 33361262 ~ 33387966 (+)
trnag-ucc-138 NA coding upstream 297804 33251296 ~ 33251367 (+)
trnag-ucc-137 NA coding upstream 299212 33249888 ~ 33249959 (+)
trnag-ucc-136 NA coding upstream 302028 33247072 ~ 33247143 (+)
trnag-ucc-135 NA coding upstream 303436 33245664 ~ 33245735 (+)
LOC110531947 LOC106571849 coding downstream 177153 33863184 ~ 33925784 (+)
rl32 rl32 coding downstream 366265 34052296 ~ 34057570 (+)
LOC110531951 LOC106571855 coding downstream 372038 34058069 ~ 34128871 (+)
LOC110531954 LOC106566658 coding downstream 595310 34281341 ~ 34298265 (+)
LOC110531955 143b2 coding downstream 658324 34344355 ~ 34349297 (+)
G795617 NA non-coding upstream 157366 33391332 ~ 33391805 (+)
G795568 NA non-coding upstream 220817 33328115 ~ 33328354 (+)
G795564 NA non-coding upstream 225325 33323351 ~ 33323846 (+)
G795560 NA non-coding upstream 226563 33322203 ~ 33322608 (+)
G795477 NA non-coding upstream 232276 33251021 ~ 33316895 (+)
G795810 NA non-coding downstream 2368 33688399 ~ 33689030 (+)
G795813 NA non-coding downstream 5725 33691756 ~ 33691961 (+)
G795818 NA non-coding downstream 9975 33696006 ~ 33696221 (+)
G795820 NA non-coding downstream 11772 33697803 ~ 33698157 (+)
G795725 NA non-coding downstream 13796 33699827 ~ 33700300 (+)
G794886 LOC106577459 other upstream 961783 32583606 ~ 32587388 (+)
G794893 NA other upstream 1046422 32502396 ~ 32502749 (+)
G794892 NA other upstream 1046816 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 1424320 32122682 ~ 32124851 (+)
LOC110531915 LOC106595846 other upstream 1792726 31753182 ~ 31757502 (+)
G796495 LOC106613263 other downstream 435391 34121422 ~ 34121740 (+)
G797056 NA other downstream 869900 34555931 ~ 34556622 (+)
G797932 pphln other downstream 1678957 35364988 ~ 35372148 (+)
G799053 NA other downstream 2627098 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 3348387 37034418 ~ 37035918 (+)

Expression


Co-expression Network