Item | Value |
---|---|
gene id | LOC110531949 |
gene name | LOC106571850 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 34006952 ~ 34034490 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
DDB1- and CUL4-associated factor 1-like isoform X2 |
id | description |
---|---|
K11789 | DCAF1, VPRBP; DDB1- and CUL4-associated factor 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021615494.2 | False | 5099 | mRNA | 0.55 | 24 | 34006952 | 34032689 |
XM_036987838.1 | False | 5206 | mRNA | 0.55 | 25 | 34006952 | 34033504 |
XM_036987839.1 | False | 5163 | mRNA | 0.55 | 25 | 34006952 | 34034242 |
XM_021615492.2 | False | 5263 | mRNA | 0.54 | 25 | 34006952 | 34034489 |
XM_021615493.2 | True | 5261 | mRNA | 0.54 | 25 | 34006952 | 34034490 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110531948 | LOC106571850 | coding | downstream | 7944 | 33940435 ~ 33999008 (-) |
LOC110531946 | LOC106571846 | coding | downstream | 205453 | 33779448 ~ 33801499 (-) |
LOC118966028 | NA | coding | downstream | 664107 | 33341652 ~ 33342845 (-) |
LOC110531942 | LOC106571840 | coding | downstream | 687963 | 33283869 ~ 33318989 (-) |
trnap-agg-56 | NA | coding | downstream | 773531 | 33233350 ~ 33233421 (-) |
LOC110531953 | LOC106571856 | coding | upstream | 99080 | 34133570 ~ 34163176 (-) |
LOC110531153 | LOC106571861 | coding | upstream | 325488 | 34359904 ~ 34361763 (-) |
LOC110531957 | LOC106571860 | coding | upstream | 327680 | 34362170 ~ 34385873 (-) |
LOC110531958 | LOC106571859 | coding | upstream | 394578 | 34429068 ~ 34531428 (-) |
LOC118966030 | NA | coding | upstream | 562050 | 34596540 ~ 34607133 (-) |
G796305 | NA | non-coding | downstream | 96118 | 33908489 ~ 33910834 (-) |
G796304 | NA | non-coding | downstream | 98554 | 33907298 ~ 33908398 (-) |
G796258 | NA | non-coding | downstream | 157827 | 33844007 ~ 33849125 (-) |
G796245 | NA | non-coding | downstream | 180660 | 33823500 ~ 33826292 (-) |
G796058 | NA | non-coding | downstream | 275636 | 33731092 ~ 33731316 (-) |
G796749 | NA | non-coding | upstream | 27891 | 34062381 ~ 34062646 (-) |
G796751 | NA | non-coding | upstream | 29995 | 34064485 ~ 34064730 (-) |
G796752 | NA | non-coding | upstream | 30275 | 34064765 ~ 34065000 (-) |
G796762 | NA | non-coding | upstream | 43117 | 34077607 ~ 34077811 (-) |
G796777 | NA | non-coding | upstream | 62799 | 34097289 ~ 34097523 (-) |
G794311 | LOC106577443 | other | downstream | 1978684 | 32026071 ~ 32028445 (-) |
G793842 | NA | other | downstream | 2344754 | 31661239 ~ 31662198 (-) |
G793489 | NA | other | downstream | 2587979 | 31418455 ~ 31418973 (-) |
G793472 | NA | other | downstream | 2603083 | 31403482 ~ 31403869 (-) |
G792267 | NA | other | downstream | 3648988 | 30315310 ~ 30357964 (-) |
G796733 | rl32 | other | upstream | 16569 | 34051059 ~ 34057549 (-) |
G797605 | NA | other | upstream | 835465 | 34869955 ~ 34875879 (-) |
G798195 | NA | other | upstream | 1319729 | 35354219 ~ 35354675 (-) |
LOC110531966 | LOC106571884 | other | upstream | 1351363 | 35381661 ~ 35400349 (-) |
LOC118966032 | LOC106571870 | other | upstream | 1457536 | 35492026 ~ 35521884 (-) |