LOC110531960


Basic Information

Item Value
gene id LOC110531960
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34610290 ~ 34612491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989281.1
CAGAAGCACAGATATGTGCTGTGAtgttgagaggagagggactctcctggaagctGTTTCTGCTAATAGTATACAATATATCTGGTGGGTAAAGACATGAACCCCCAAGAGGAACACTGGATGGTCACTCTGCAGGTTGTGTTCTACCCAGCCTTGGCTATAGTGGGCATCCCCTCCAACATTGTTACCTTTCTCATCTTCTGGCGGAGAAACTGCCTGCTGTCCAAGTCCAGCACCTTCTACCTGATGGCCATCTCTGTAGCTGACACTCTGGTCCTCATCTTCATCGTGGTGCTGGAGATCACTGTCAAATTTTACCAGGAGGTACTTATTTCATCAGAAATGTCACTGTTCTTTTCATTTCTTGTTCTGTCAGTAAAAGTTTACATTGGATTTCTATAGTAACGCTGTAATTACTACAGTAACAGCAAACAGCATTGTATTAACGCAGTAGCCTATTTCAGGGCTTCCCAAACTTTGTTCCAGGGCCTCCCTAGTACATGCTTTAGTTTTTGCCCAAGTAGTA

Function

NR:

description
probable G-protein coupled receptor 139

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989281.1 True 526 mRNA 0.44 2 34610290 34612491

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 217328 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 260993 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 312025 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 481419 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 552720 34052296 ~ 34057570 (+)
LOC110531961 LOC106571864 coding downstream 30428 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 333649 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 603380 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 787188 35399679 ~ 35403549 (+)
LOC110531968 LOC106571869 coding downstream 809074 35421565 ~ 35469496 (+)
G797115 NA non-coding upstream 5976 34599357 ~ 34604314 (+)
G797101 NA non-coding upstream 19629 34590458 ~ 34590661 (+)
G797080 NA non-coding upstream 32982 34576845 ~ 34577308 (+)
G797057 NA non-coding upstream 49523 34560389 ~ 34560767 (+)
G797045 NA non-coding upstream 59088 34550846 ~ 34551202 (+)
G797132 NA non-coding downstream 1911 34614402 ~ 34615276 (+)
G797201 NA non-coding downstream 133425 34745916 ~ 34776053 (+)
G797225 NA non-coding downstream 157572 34770063 ~ 34867567 (+)
G797271 NA non-coding downstream 205674 34818165 ~ 34824262 (+)
G797309 NA non-coding downstream 255816 34868307 ~ 34875882 (+)
G797056 NA other upstream 53668 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 488550 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2022902 32583606 ~ 32587388 (+)
G794893 NA other upstream 2107541 32502396 ~ 32502749 (+)
G794892 NA other upstream 2107935 32501847 ~ 32502355 (+)
G797932 pphln other downstream 752497 35364988 ~ 35372148 (+)
G799053 NA other downstream 1700638 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2421927 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2954754 37567245 ~ 37570411 (+)
G800834 NA other downstream 3457725 38070216 ~ 38071433 (+)

Expression


Co-expression Network