eif2d (eif2d)


Basic Information

Item Value
gene id eif2d
gene name eif2d
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34617500 ~ 34636294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615504.2
GAACAAACTAGCAGCAATGGCAGAGTCTTGTCGGAAGTCTTTTATGATGCACCAAAATGGACACGCTGTTTTCCATTTCTagtactgtattttttttttaacgaaTGAGCTTGCGAAATGCGGATTTAAACTGAGTAAATATTTTAACACATCTCAGGAGTAAGAGCTTGAATTTAACGACGGTACCATTTACGATGTTTTCGAAATCGTTCCGTGTCAAGTCCAACACAGTGATCAAAGGATCCGACAGGAGGAAGCTGAAAGCGGACATATCCACagcctttccctctctgtctgtggagGACTTGTCCGAGTTGGTCCCAAACAAGGAGGAGCTGAATGTCGTGAAGATTTATGCTCACAAGGGAGATGCAGTGACCCTCTACGTGCTTCATAAGAACCCAGTGTTGTTTGAGCTGGAGAAATGTCTCTATCCCACAGTGTATACGCTTTGGCGTTATCCCCATGTCTTGCCAACATTCACAACATGGCCTCCAGTGCTACAGAAGCTGGCTGGAGGGGCAGATCTCATGCTGCCTGGAGTGGTGGTGCCTCTAAGTGGGATCCCAGAGGTGAAGAAGGGGGACTGCTGTGCTGTTAAAGTTGTTAGCAACAGGGCTCCCATGGCAGTGGGCACTGCCACCATGTCCAGTGCTGAGATGAGGAGCTTGGGCATGAAGGGCAGAGGGGTGTCAGTCCTCCACACCTACATGGACAGCCTGTGGGCATTTGGAGACAAGTCTGGTCCTCCCTCCATTcctgatgtggacactgagggtGTCGAGGCAACctatgaagaagaagaagaggaggaggatgatgatgaggcaACAGAGGGGAGTGAAGAGGAACCCTGTCCCAACCGTGTCCCAGATGCCCCCTGCCCTGGTATCCAGGAGCTCAGCCTGGCtgacagggaggagggggagcacgggaaagaggaaggagaagacCCAGAGGACCTGAGAAGCCCACAAGAGCAGATGGATGCCCTGCTGCTGCAGTGTTTCCTCCAGGCGCTCAAGAGCAAAGTGAAGAAGTCAGAGCTCCCCCTGCTGACCAGTAGCTTCCTGCGCATCCACATGTTCTCCTGCTGTCCAAGTGGAAAGCAACTTGACATCAAGAAATCAAGCTATAAAAAGttATCCAAGTTCCTTCAGTGCatgcagcagcagcacagcctGGTGAGGGTGAAGGAGCTGAGTAAAGGGGTGGAGAGCATTGTAGAGGTTGACTGGAAAAACCCAGAACTGCGCTCCTTCCGAACCCCAAAGGATCCTGGGATAGAGGAGGCCTCAGTGGAGGTGGGAAGAGCAGAGGGGGAGAAGCCCTACCACCCCCCTGAGATCACTACCCTCTACAGTGTGTCCTCTCGTCTGGAGCCTCTGTTTCAAGATGCCAAGAAGAGGAAAGGAACAGTACTCCAACCAGCGGAAGTGAGAGCAATCATCACAGATTATGTGAAGAGGAACGAGCTGGTGGATGAGAATAATAAAAATTATGTCATCATTAACCCGATCCTATGTGACTGCCTACTGGAGAAGTCAGAGTACCAGGAGGTGGAGGCACTCAAGTGGGATGACCTCTTCAGCAGGACGCTATACAAAATGCAGCACTGCCACCAGCTGGTGTTCCCTGGCCAGCCACCCATAGTAAAGAAGGGCCACATTGAGCCCATAGACATCTCTGTGGCCTCCAGGGGCTCCAACAAGAAGGTGACAATGATAAAGAACCTGGAGGTGTATGGTCTGGACCCCATGGCTGTGTCAGTCGCCCTGCAGCACAGAGTCCAGGCCAGCTCAGCCCTGAACCCGGTTCCCGGCTCCAAGGACCGAGTCCTAGTCCAAATACAGGGAAACCAGGTCCAACAAGTCTGCAAACTTCTACTAGATAAGTATCAAATTCCCTGCAAGTACATCCAGGGACTAGACAACAAAGTTCAGAAGCCTGGGAGGAAGAAATAGTACATCTTCAATCTTTCATCAACGAGTATGTGTAGATGTGCAAAAAAGCCCAACAACAAAATGTTTATCATTCATGAAATAAAGTCTACTCCAGGATTTGGCTAAA

Function

symbol description
eif2d Predicted to enable translation initiation factor activity. Predicted to be involved in formation of translation preinitiation complex. Predicted to act upstream of or within translational initiation. Orthologous to human EIF2D (eukaryotic translation initiation factor 2D).

NR:

description
eukaryotic translation initiation factor 2D isoform X1

GO: NA

KEGG:

id description
K15027 EIF2D; translation initiation factor 2D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615504.2 True 2070 mRNA 0.50 15 34617500 34636294

Neighbor

gene id symbol gene type direction distance location
LOC118966030 NA coding downstream 10367 34596540 ~ 34607133 (-)
LOC110531958 LOC106571859 coding downstream 86072 34429068 ~ 34531428 (-)
LOC110531957 LOC106571860 coding downstream 231627 34362170 ~ 34385873 (-)
LOC110531153 LOC106571861 coding downstream 255737 34359904 ~ 34361763 (-)
LOC110531953 LOC106571856 coding downstream 454324 34133570 ~ 34163176 (-)
LOC110533011 LOC106571887 coding upstream 79446 34715740 ~ 34721316 (-)
LOC110531962 LOC106571888 coding upstream 93040 34729334 ~ 34802834 (-)
LOC110531965 pphln coding upstream 727758 35364052 ~ 35372459 (-)
LOC110531966 LOC106571884 coding upstream 745367 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 coding upstream 858770 35492026 ~ 35521884 (-)
G797443 NA non-coding downstream 4986 34612174 ~ 34612514 (-)
G797439 NA non-coding downstream 7934 34609361 ~ 34609566 (-)
G797122 NA non-coding downstream 13042 34599131 ~ 34604458 (-)
G797107 NA non-coding downstream 23655 34593643 ~ 34593845 (-)
G797102 NA non-coding downstream 26368 34590744 ~ 34591132 (-)
G797480 LOC106571864 non-coding upstream 30214 34666508 ~ 34676144 (-)
G797607 NA non-coding upstream 245696 34881990 ~ 34885845 (-)
G797608 NA non-coding upstream 266139 34902433 ~ 34939456 (-)
G797611 NA non-coding upstream 269193 34905487 ~ 34907574 (-)
G797612 NA non-coding upstream 277606 34913900 ~ 34918197 (-)
G796733 rl32 other downstream 559951 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2589232 32026071 ~ 32028445 (-)
G793842 NA other downstream 2955302 31661239 ~ 31662198 (-)
G793489 NA other downstream 3198527 31418455 ~ 31418973 (-)
G793472 NA other downstream 3213631 31403482 ~ 31403869 (-)
G797605 NA other upstream 233661 34869955 ~ 34875879 (-)
G798195 NA other upstream 717925 35354219 ~ 35354675 (-)
LOC110531979 brpf1 other upstream 1341128 35948544 ~ 35979307 (-)

Expression


Co-expression Network