LOC110531961 (LOC106571864)


Basic Information

Item Value
gene id LOC110531961
gene name LOC106571864
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34642919 ~ 34682784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615507.2
ctgtctcattgttctatctgtggtgcCCGCTTCACGAAGAATAACCCTTCCTCCTTTCTCTGGTGGTGACTTTATTAATGCAGGTGGCAGTGAGTGAGTCGGAACGAGTCAACGTAGCCAGCTAGCTTCGCCGCCAGATAAGTTGATATAACTTTGCAAGCTATGAATATCACTCGACGGTTCATAAGCAAGTAGATTAGATAGCTTGCTCATTTGCTATCTATCTAAAGTAATTATAAGGGTACTGTAGCACTGTGAGATATTGCTAGATCGTTAGCATGCTAGTGCAACCACACATCAGCAGGTGGTAGGTAGCTAGCATTAGCGAACTATTAAGGAAGCCACTGTTTCCATCTTAACTGAGGATTTCACGGCGGAAAAATTAGAATTGTTATCAGTGAATCCGCGCTCTCAAACCAAATCAGAAAAATGTGGTCGAATCCTCAGAACCAGAATCAACCGGCGTTTCCGAACCAACAGCAAGTGCCAAATCTGAACTCTGCTCCCTTTCCTCCGTTTTTCGCCAAACCCCACAACCCTCTTCAAATAAAAAAGAATGCCATAACTGACGACTACAAAGTTACAAATCAAGTCCTTGGTATGGGCATCAATGGGAAAGTATTGGAAATATTCCAAAAAGGAAGTGGAGATAAATACGCTCTGAAGATTCTGCAGGATTGTGCGAAGGCTCGTCGGGAGGTAGAGCTCCACTGGAGGGCGTCGCCCTGCTCTCACATCGTACGCATCATGGACGTCTATGAAAACCTCTACCAAGGCAGGAAGTGCCTGCTCATCGTCATGGAGTGtATGGATGGAGGTGAGCTATTCAGCCATATTCAAGACCGGGGGAACCAGGCATTCACAGAAAGAGAGGCCTCTGACATCATGAAGAGTATAGGAGAAGCTATCCAGTACCTGCATGCCATTGACATCGCTCATAGAGACATTAAGCCAGAAAATCTGTTGTACACTTCCAAAAAACCAGATGCACTCCTCAAACTAACCGATTTTGGGTTTGCCAAAGAAATCACCACACTCAACTCCCTGGCAACGCCATGCTACACCCCCTATTATGTTGCCCCTGAGGTTCTTGGTCCAGAGAAGTACGACAAATCCTGTGATATGTGGTCTCTGGGTGTTATCATGTATATCCTGCTGTGTGGATATCCTCCCTTCTACTCTAACCACGGCCTGGCCATCTCCCCTGGGATGAAAAAGCGCATCAGGAACGGACAGTACGAGTTCCCCAACCCAGAGTGGTCTGACGTGTCAGAGgacgCCAAACAGTTGATCCGTTACTTACTGAAGACTGAGCCCACCCAGAGGATGAGCATCACAGAGTTCATGAACCACCCCTGGATCAATCAGTCTATGGAGGTCCCTCAGACCCCTCTCCACACCAGTCGCGTACTGCAGGAGGAGCAGGACGTCTGGGAGGAGGTCAAGGAGGAAATGACAAGTGCCCTGGCAACCATGAGAGTGGACTATGAGCAAATCAAAATCAAGACCATCGAGGATTCGACCAATCCGCTGCTGATTAAGAGAAGGAAGAAAGCAAACAATGCAGCCACTAAACCACCAGGCCTGTGAAACAAAATAACTTGCACCGCACATGCCCTTCCATGCGGTGAAAGAGAGCTGATAGGGCAAACAGGGATTATTTAAAGGGTGAAAGTCTGAATCTCCAGAAATATTACTTTTCCAGTTTTTTGAACTTCCTTTTTAGTTGTTTTATTCTCATCGTTTTACCccattttaatgttttttttcccccaccttGCCATTCAAGGTAAAGAACCATTTTGTTCATGTGCTTTTTTGTCCACACAGAGATCAGATGTTTATCGTCACGTCTCTGTGATGTACTGGGTTTTTCTGTCGTTGTTGCTGATCACTGCAAGCTGACTGCACTGTAACTAATCCAGTATCTTGACCCAGCTCTGTTCTGTGTTTTATCATTGTTGATTCCCCTCGGTATTGGCCACATGTTTTTCTAACTTTATCTGTGGGTCTTCAGATGATACTGCCATGAAAACATTGAATGCTTCTCCAGTTATACTGTGGATCCATAATATTTTTCTGCTATGCACTGGTTAACTCTACACAATGGAGGAAGCATCACTTTTCTTTGTTTAATTGGATGTCCTTTAGTTTCTTCTTCCTTTAGTTGTCATTCATTTTATATACTTATTCACACCTCACACCAACAATATACATTTTCTATTTGTTGTGTGAGGTTTTTGTTGCCCCGAACTCTCTGATTTTATTTTGATTGGACTTCTAAGTTGTATGACTGCAGTTGACTGTGTTTTCATTGTTGGTTGGGTTTGATTTCTTAGCCAACGCACCCATAGCCAAAGTTATAGTCACCATATTTTTTAGAGTGGACTGACTGTTTAGAAAGACTGTGTGCCTTGAGGACATTGGGAAAAATCCTTACTTGATATTTATGCTCACAGCCTAACTTTTCACACACATCTATCTCCCATTGAGGTAATGCATGATTGACACAAGTTCAAGGTCTGTGCACTAATCTCAAATTTAAATTTTTCCCAGTATGATAACAGTGGGGGAATATTCAAGCCACTTTGGCTGTAGCAAATGTACATTGTGTTATCAAATATCCAAACCATGAGATCACAAAATCACCACATCCCACAGATGTTGTAGCCTACTTCACAATTATCCTGATTGCAAttgtttaaatatattttcagtGAATTCCCACTAATGAACTATACAACACAAGTGTCACTATTAGTTTCCACGCAGCAGCAATAATGTTTTGGGTTTCTGCTGTGTTAGGTGATGGGGAACACTGAGTGTAGGGCACCATTGTAATGCATAGTGGTATGGCAGTACACATATGACATGTAGCACTGGCTGTCTTTTGGATTAAAACTTGTATAAAATCCCTTA

Function

NR:

description
MAP kinase-activated protein kinase 2-like

GO: NA

KEGG:

id description
K04443 MAPKAPK2; mitogen-activated protein kinase-activated protein kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615507.2 True 2919 mRNA 0.43 10 34642919 34682784

Neighbor

gene id symbol gene type direction distance location
LOC110531960 NA coding upstream 30428 34610290 ~ 34612491 (+)
LOC118966029 NA coding upstream 249957 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 293622 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 344654 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 514048 34058069 ~ 34128871 (+)
LOC110531155 LOC106571865 coding downstream 263356 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 533087 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 716895 35399679 ~ 35403549 (+)
LOC110531968 LOC106571869 coding downstream 738781 35421565 ~ 35469496 (+)
LOC110531969 LOC106571870 coding downstream 804584 35487368 ~ 35496138 (+)
G797132 NA non-coding upstream 27643 34614402 ~ 34615276 (+)
G797115 NA non-coding upstream 38605 34599357 ~ 34604314 (+)
G797101 NA non-coding upstream 52258 34590458 ~ 34590661 (+)
G797080 NA non-coding upstream 65611 34576845 ~ 34577308 (+)
G797057 NA non-coding upstream 82152 34560389 ~ 34560767 (+)
G797201 NA non-coding downstream 63132 34745916 ~ 34776053 (+)
G797225 NA non-coding downstream 87279 34770063 ~ 34867567 (+)
G797271 NA non-coding downstream 135381 34818165 ~ 34824262 (+)
G797309 NA non-coding downstream 185523 34868307 ~ 34875882 (+)
G797312 NA non-coding downstream 199216 34882000 ~ 34922396 (+)
G797056 NA other upstream 86297 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 521179 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2055531 32583606 ~ 32587388 (+)
G794893 NA other upstream 2140170 32502396 ~ 32502749 (+)
G794892 NA other upstream 2140564 32501847 ~ 32502355 (+)
G797932 pphln other downstream 682204 35364988 ~ 35372148 (+)
G799053 NA other downstream 1630345 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2351634 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2884461 37567245 ~ 37570411 (+)
G800834 NA other downstream 3387432 38070216 ~ 38071433 (+)

Expression


Co-expression Network