trnag-ucc-143



Basic Information


Item Value
gene id trnag-ucc-143
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36466414 ~ 36466485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnag-ucc-143
gcattggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnag-ucc-143 True 72 mRNA 0.56 1 36466414 36466485

Neighbor


gene id symbol gene type direction distance location
trnag-ucc-142 NA coding downstream 1332 36465011 ~ 36465082 (-)
trnag-ucc-141 NA coding downstream 2735 36463608 ~ 36463679 (-)
trnag-ucc-140 NA coding downstream 4138 36462205 ~ 36462276 (-)
trnag-ucc-139 NA coding downstream 5537 36460806 ~ 36460877 (-)
LOC110531936 LOC106580204 coding downstream 97064 36335384 ~ 36369350 (-)
trnag-ucc-144 NA coding upstream 1332 36467817 ~ 36467888 (-)
trnag-ucc-145 NA coding upstream 2735 36469220 ~ 36469291 (-)
trnag-ucc-146 NA coding upstream 4138 36470623 ~ 36470694 (-)
trnag-ucc-147 NA coding upstream 5541 36472026 ~ 36472097 (-)
trnag-ucc-148 NA coding upstream 22224 36488709 ~ 36488780 (-)
G799212 NA non-coding downstream 7780 36456192 ~ 36458634 (-)
G799207 NA non-coding downstream 13381 36446170 ~ 36453033 (-)
G799208 NA non-coding downstream 19403 36446622 ~ 36447011 (-)
G799196 NA non-coding downstream 28953 36437251 ~ 36437461 (-)
G799193 NA non-coding downstream 46329 36419826 ~ 36420085 (-)
trnag-ucc-169 NA non-coding upstream 56897 36523382 ~ 36523664 (-)
G799353 NA non-coding upstream 184804 36651289 ~ 36651597 (-)
G799368 NA non-coding upstream 202933 36669418 ~ 36669643 (-)
G799434 NA non-coding upstream 338462 36804947 ~ 36805294 (-)
G799440 NA non-coding upstream 346251 36812736 ~ 36813012 (-)
G798993 NA other downstream 315777 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 487299 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 945082 35492026 ~ 35521884 (-)
LOC110531966 LOC106571884 other downstream 1079282 35381661 ~ 35400349 (-)
G798195 NA other downstream 1111739 35354219 ~ 35354675 (-)
LOC110531982 LOC106571893 other upstream 361411 36827882 ~ 36907700 (-)
G800318 NA other upstream 877910 37344395 ~ 37345147 (-)
LOC110532015 LOC106566767 other upstream 2374724 38839265 ~ 38841685 (-)
G802100 NA other upstream 2499971 38966456 ~ 38996032 (-)
G802138 NA other upstream 2584045 39050530 ~ 39061381 (-)

Expression



Co-expression Network