trnap-agg-57


Basic Information

Item Value
gene id trnap-agg-57
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36472907 ~ 36472978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-57
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-57 True 72 mRNA 0.60 1 36472907 36472978

Neighbor

gene id symbol gene type direction distance location
si:dkey-7l6.3 LOC106580210 coding upstream 76813 36386918 ~ 36396094 (+)
LOC110531941 LOC106580207 coding upstream 209983 36249344 ~ 36262924 (+)
LOC110531975 LOC106571876 coding upstream 579497 35885933 ~ 35893410 (+)
LOC110531973 LOC106571875 coding upstream 616803 35752012 ~ 35856104 (+)
LOC110531972 LOC106566626 coding upstream 728487 35666422 ~ 35744420 (+)
trnap-agg-58 NA coding downstream 1158 36474136 ~ 36474207 (+)
trnap-agg-59 NA coding downstream 3792 36476770 ~ 36476841 (+)
trnap-agg-60 NA coding downstream 5023 36478001 ~ 36478072 (+)
trnap-agg-61 NA coding downstream 6252 36479230 ~ 36479301 (+)
trnap-agg-62 NA coding downstream 8886 36481864 ~ 36481935 (+)
G799200 NA non-coding upstream 13489 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 24817 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 62090 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 69918 36399824 ~ 36402989 (+)
G799096 NA non-coding upstream 73534 36398201 ~ 36399373 (+)
G799214 NA non-coding downstream 3118 36476096 ~ 36495052 (+)
G799216 NA non-coding downstream 50406 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 63260 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 65320 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 90414 36563392 ~ 36585315 (+)
G799053 NA other upstream 156102 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1100759 35364988 ~ 35372148 (+)
G797056 NA other upstream 1916285 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2351167 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3885519 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 561440 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1094267 37567245 ~ 37570411 (+)
G800834 NA other downstream 1597238 38070216 ~ 38071433 (+)
G801778 NA other downstream 2315083 38788061 ~ 38788354 (+)
G801851 NA other downstream 2459974 38932952 ~ 38933868 (+)

Expression


Co-expression Network