trnap-agg-60


Basic Information

Item Value
gene id trnap-agg-60
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36478001 ~ 36478072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-60
ggcttgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-60 True 72 mRNA 0.58 1 36478001 36478072

Neighbor

gene id symbol gene type direction distance location
trnap-agg-59 NA coding upstream 1160 36476770 ~ 36476841 (+)
trnap-agg-58 NA coding upstream 3794 36474136 ~ 36474207 (+)
trnap-agg-57 NA coding upstream 5023 36472907 ~ 36472978 (+)
si:dkey-7l6.3 LOC106580210 coding upstream 81907 36386918 ~ 36396094 (+)
LOC110531941 LOC106580207 coding upstream 215077 36249344 ~ 36262924 (+)
trnap-agg-61 NA coding downstream 1158 36479230 ~ 36479301 (+)
trnap-agg-62 NA coding downstream 3792 36481864 ~ 36481935 (+)
trnap-agg-63 NA coding downstream 5021 36483093 ~ 36483164 (+)
trnap-agg-64 NA coding downstream 7481 36485553 ~ 36485624 (+)
trnap-agg-65 NA coding downstream 8884 36486956 ~ 36487027 (+)
G799200 NA non-coding upstream 18583 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 29911 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 67184 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 75012 36399824 ~ 36402989 (+)
G799096 NA non-coding upstream 78628 36398201 ~ 36399373 (+)
G799216 NA non-coding downstream 45312 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 58166 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 60226 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 85320 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 132795 36610867 ~ 36622475 (+)
G799053 NA other upstream 161196 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1105853 35364988 ~ 35372148 (+)
G797056 NA other upstream 1921379 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2356261 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3890613 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 556346 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1089173 37567245 ~ 37570411 (+)
G800834 NA other downstream 1592144 38070216 ~ 38071433 (+)
G801778 NA other downstream 2309989 38788061 ~ 38788354 (+)
G801851 NA other downstream 2454880 38932952 ~ 38933868 (+)

Expression


Co-expression Network