trnap-agg-62


Basic Information

Item Value
gene id trnap-agg-62
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36481864 ~ 36481935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-62
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-62 True 72 mRNA 0.60 1 36481864 36481935

Neighbor

gene id symbol gene type direction distance location
trnap-agg-61 NA coding upstream 2563 36479230 ~ 36479301 (+)
trnap-agg-60 NA coding upstream 3792 36478001 ~ 36478072 (+)
trnap-agg-59 NA coding upstream 5023 36476770 ~ 36476841 (+)
trnap-agg-58 NA coding upstream 7657 36474136 ~ 36474207 (+)
trnap-agg-57 NA coding upstream 8886 36472907 ~ 36472978 (+)
trnap-agg-63 NA coding downstream 1158 36483093 ~ 36483164 (+)
trnap-agg-64 NA coding downstream 3618 36485553 ~ 36485624 (+)
trnap-agg-65 NA coding downstream 5021 36486956 ~ 36487027 (+)
trnap-agg-66 NA coding downstream 6424 36488359 ~ 36488430 (+)
trnap-agg-67 NA coding downstream 9229 36491164 ~ 36491235 (+)
G799200 NA non-coding upstream 22446 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 33774 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 71047 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 78875 36399824 ~ 36402989 (+)
G799096 NA non-coding upstream 82491 36398201 ~ 36399373 (+)
G799216 NA non-coding downstream 41449 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 54303 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 56363 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 81457 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 128932 36610867 ~ 36622475 (+)
G799053 NA other upstream 165059 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1109716 35364988 ~ 35372148 (+)
G797056 NA other upstream 1925242 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2360124 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3894476 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 552483 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1085310 37567245 ~ 37570411 (+)
G800834 NA other downstream 1588281 38070216 ~ 38071433 (+)
G801778 NA other downstream 2306126 38788061 ~ 38788354 (+)
G801851 NA other downstream 2451017 38932952 ~ 38933868 (+)

Expression


Co-expression Network