trnap-agg-71


Basic Information

Item Value
gene id trnap-agg-71
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36499236 ~ 36499307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-71
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-71 True 72 mRNA 0.58 1 36499236 36499307

Neighbor

gene id symbol gene type direction distance location
trnap-agg-70 NA coding upstream 1160 36498005 ~ 36498076 (+)
trnap-agg-69 NA coding upstream 2391 36496774 ~ 36496845 (+)
trnap-agg-68 NA coding upstream 5196 36493969 ~ 36494040 (+)
trnap-agg-67 NA coding upstream 8001 36491164 ~ 36491235 (+)
trnap-agg-66 NA coding upstream 10806 36488359 ~ 36488430 (+)
trnap-agg-72 NA coding downstream 1160 36500467 ~ 36500538 (+)
trnap-agg-73 NA coding downstream 2391 36501698 ~ 36501769 (+)
trnap-agg-74 NA coding downstream 3622 36502929 ~ 36503000 (+)
trnap-agg-75 NA coding downstream 4853 36504160 ~ 36504231 (+)
trnap-agg-76 NA coding downstream 6084 36505391 ~ 36505462 (+)
G799214 NA non-coding upstream 4184 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 39818 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 51146 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 88419 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 96247 36399824 ~ 36402989 (+)
G799216 NA non-coding downstream 24077 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 36931 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 38991 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 64085 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 111560 36610867 ~ 36622475 (+)
G799053 NA other upstream 182431 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1127088 35364988 ~ 35372148 (+)
G797056 NA other upstream 1942614 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2377496 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3911848 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 535111 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1067938 37567245 ~ 37570411 (+)
G800834 NA other downstream 1570909 38070216 ~ 38071433 (+)
G801778 NA other downstream 2288754 38788061 ~ 38788354 (+)
G801851 NA other downstream 2433645 38932952 ~ 38933868 (+)

Expression


Co-expression Network