trnap-agg-78


Basic Information

Item Value
gene id trnap-agg-78
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36507854 ~ 36507925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-78
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-78 True 72 mRNA 0.58 1 36507854 36507925

Neighbor

gene id symbol gene type direction distance location
trnap-agg-77 NA coding upstream 1160 36506623 ~ 36506694 (+)
trnap-agg-76 NA coding upstream 2392 36505391 ~ 36505462 (+)
trnap-agg-75 NA coding upstream 3623 36504160 ~ 36504231 (+)
trnap-agg-74 NA coding upstream 4854 36502929 ~ 36503000 (+)
trnap-agg-73 NA coding upstream 6085 36501698 ~ 36501769 (+)
trnap-agg-79 NA coding downstream 1160 36509085 ~ 36509156 (+)
trnap-agg-80 NA coding downstream 2391 36510316 ~ 36510387 (+)
trnap-agg-81 NA coding downstream 3622 36511547 ~ 36511618 (+)
trnap-agg-82 NA coding downstream 4853 36512778 ~ 36512849 (+)
trnap-agg-83 NA coding downstream 6084 36514009 ~ 36514080 (+)
G799214 NA non-coding upstream 12802 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 48436 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 59764 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 97037 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 104865 36399824 ~ 36402989 (+)
G799216 NA non-coding downstream 15459 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 28313 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 30373 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 55467 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 102942 36610867 ~ 36622475 (+)
G799053 NA other upstream 191049 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1135706 35364988 ~ 35372148 (+)
G797056 NA other upstream 1951232 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2386114 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3920466 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 526493 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1059320 37567245 ~ 37570411 (+)
G800834 NA other downstream 1562291 38070216 ~ 38071433 (+)
G801778 NA other downstream 2280136 38788061 ~ 38788354 (+)
G801851 NA other downstream 2425027 38932952 ~ 38933868 (+)

Expression


Co-expression Network