trnap-agg-87


Basic Information

Item Value
gene id trnap-agg-87
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36518933 ~ 36519004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-87
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-87 True 72 mRNA 0.58 1 36518933 36519004

Neighbor

gene id symbol gene type direction distance location
trnap-agg-86 NA coding upstream 1160 36517702 ~ 36517773 (+)
trnap-agg-85 NA coding upstream 2391 36516471 ~ 36516542 (+)
trnap-agg-84 NA coding upstream 3622 36515240 ~ 36515311 (+)
trnap-agg-83 NA coding upstream 4853 36514009 ~ 36514080 (+)
trnap-agg-82 NA coding upstream 6084 36512778 ~ 36512849 (+)
trnap-agg-88 NA coding downstream 1332 36520336 ~ 36520407 (+)
trnap-agg-89 NA coding downstream 2563 36521567 ~ 36521638 (+)
trnap-agg-90 NA coding downstream 4139 36523143 ~ 36523214 (+)
trnap-agg-91 NA coding downstream 6601 36525605 ~ 36525676 (+)
trnap-agg-92 NA coding downstream 7832 36526836 ~ 36526907 (+)
G799214 NA non-coding upstream 23881 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 59515 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 70843 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 108116 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 115944 36399824 ~ 36402989 (+)
G799216 NA non-coding downstream 4380 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 17234 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 19294 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 44388 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 91863 36610867 ~ 36622475 (+)
G799053 NA other upstream 202128 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1146785 35364988 ~ 35372148 (+)
G797056 NA other upstream 1962311 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2397193 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3931545 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 515414 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1048241 37567245 ~ 37570411 (+)
G800834 NA other downstream 1551212 38070216 ~ 38071433 (+)
G801778 NA other downstream 2269057 38788061 ~ 38788354 (+)
G801851 NA other downstream 2413948 38932952 ~ 38933868 (+)

Expression


Co-expression Network