trnap-agg-90


Basic Information

Item Value
gene id trnap-agg-90
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36523143 ~ 36523214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-90
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-90 True 72 mRNA 0.58 1 36523143 36523214

Neighbor

gene id symbol gene type direction distance location
trnap-agg-89 NA coding upstream 1505 36521567 ~ 36521638 (+)
trnap-agg-88 NA coding upstream 2736 36520336 ~ 36520407 (+)
trnap-agg-87 NA coding upstream 4139 36518933 ~ 36519004 (+)
trnap-agg-86 NA coding upstream 5370 36517702 ~ 36517773 (+)
trnap-agg-85 NA coding upstream 6601 36516471 ~ 36516542 (+)
trnap-agg-91 NA coding downstream 2391 36525605 ~ 36525676 (+)
trnap-agg-92 NA coding downstream 3622 36526836 ~ 36526907 (+)
trnap-agg-93 NA coding downstream 4853 36528067 ~ 36528138 (+)
trnap-agg-94 NA coding downstream 6084 36529298 ~ 36529369 (+)
trnap-agg-95 NA coding downstream 9771 36532985 ~ 36533056 (+)
G799214 NA non-coding upstream 28091 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 63725 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 75053 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 112326 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 120154 36399824 ~ 36402989 (+)
G799216 NA non-coding downstream 170 36523384 ~ 36523664 (+)
G799218 NA non-coding downstream 13024 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 15084 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 40178 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 87653 36610867 ~ 36622475 (+)
G799053 NA other upstream 206338 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1150995 35364988 ~ 35372148 (+)
G797056 NA other upstream 1966521 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2401403 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3935755 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 511204 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1044031 37567245 ~ 37570411 (+)
G800834 NA other downstream 1547002 38070216 ~ 38071433 (+)
G801778 NA other downstream 2264847 38788061 ~ 38788354 (+)
G801851 NA other downstream 2409738 38932952 ~ 38933868 (+)

Expression


Co-expression Network