trnap-agg-100


Basic Information

Item Value
gene id trnap-agg-100
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36540882 ~ 36540953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-100
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-100 True 72 mRNA 0.58 1 36540882 36540953

Neighbor

gene id symbol gene type direction distance location
trnap-agg-99 NA coding upstream 1332 36539479 ~ 36539550 (+)
trnap-agg-98 NA coding upstream 3966 36536845 ~ 36536916 (+)
trnap-agg-97 NA coding upstream 5369 36535442 ~ 36535513 (+)
trnap-agg-96 NA coding upstream 6601 36534210 ~ 36534281 (+)
trnap-agg-95 NA coding upstream 7826 36532985 ~ 36533056 (+)
trnap-agg-101 NA coding downstream 1332 36542285 ~ 36542356 (+)
trnap-agg-102 NA coding downstream 3794 36544747 ~ 36544818 (+)
trnap-agg-103 NA coding downstream 6250 36547203 ~ 36547274 (+)
trnap-agg-104 NA coding downstream 7481 36548434 ~ 36548505 (+)
trnap-agg-105 NA coding downstream 8884 36549837 ~ 36549908 (+)
G799219 NA non-coding upstream 2383 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 4400 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 17218 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 45830 36476096 ~ 36495052 (+)
G799201 NA non-coding upstream 92792 36446401 ~ 36448090 (+)
G799221 NA non-coding downstream 22439 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 69914 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 90338 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 98877 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 104357 36645310 ~ 36645631 (+)
G799053 NA other upstream 224077 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1168734 35364988 ~ 35372148 (+)
G797056 NA other upstream 1984260 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2419142 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3953494 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 493465 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1026292 37567245 ~ 37570411 (+)
G800834 NA other downstream 1529263 38070216 ~ 38071433 (+)
G801778 NA other downstream 2247108 38788061 ~ 38788354 (+)
G801851 NA other downstream 2391999 38932952 ~ 38933868 (+)

Expression


Co-expression Network