XLOC_026682 (si:ch211-222n22.1)


Basic Information

Item Value
gene id XLOC_026682
gene name si:ch211-222n22.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 41531279 ~ 41535761 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051967
ATAACTGCAGTGTCTCTGGGAGTCGATTCCTGTCTTCGAGTCAATTTCAGCACTTGAGGAATCGAGGAATCGACTCTTTGGAGTCGACTCCCTAATACATAAACAACGGCTTTCGATCTGCCTGTCAACAAAACTGCTCATGCGGCTACTTTCTCGCTGCTTTCGCcaatttcagGAAGAGCTGCAACAAGTTCTGCATTTGTGCATTACTCACAGAATTTGTCAATGCAGAAATGTGGCTTCCAATGGCCATCCTATCACGATGTATCACCTGCCACACCTTTTTGGAGCAAGAGATTACCTAAAGCCAGTTTCTCAGGAGGCTATAGAACCCTGTCAAGAGGAATATCTTCTGAGAGGGCCATACTCATGTGATGAGATCCACAAACAACACCTGATGAAGCTTGATGTTTTTGAGGAGCTGTATGGTTTCAATTCTGTAAGCAACAATTGTAACAACATACATCActtgaaatatatacattttattatttgc
>TCONS_00051968
ATAACTGCAGTGTCTCTGGGAGTCGATTCCTGTCTTCGAGTCAATTTCAGCACTTGAGGAATCGAGGAATCGACTCTTTGGAGTCGACTCCCTAATACATAAACAACGGCTTTCGATCTGCCTGTCAACAAAACTGCTCATGCGGCTACTTTCTCGCTGCTTTCGCcaatttcaggCAGCTGAAAGACAACGGGACGATAGACAAAGAAGAGCTGCAACAAGTTCTGCATTTGTGCATTACTCACAGAATTTGTCAATGCAGAAATGTGGCTTCCAATGGCCATCCTATCACGATGTATCACCTGCCACACCTTTTTGGAGCAAGAGATTACCTAAAGCCAGTTTCTCAGGAGGCTATAGAACCCTGTCAAGAGGAATATCTTCTGAGAGGGCCATACTCATGTGATGAGATCCACAAACAACACCTGATGAAGCTTGATGTTTTTGAGGAGCTGTATGGTTTCAATTCTGTAAGCAACAATTGTAACAACATACATCActtgaaatatatacattttattatt

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-417 No description available

Ensembl:

ensembl_id ENSDARG00000097269

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051967 False 496 mRNA 0.42 2 41531279 41535761
TCONS_00051968 True 524 lncRNA 0.43 3 41531282 41535761

Neighbor

gene id symbol gene type direction distance location
XLOC_026681 BX537310.2 coding downstream 19069 41396123 ~ 41512210 (-)
XLOC_026680 CR769786.1 coding downstream 219136 41312022 ~ 41312143 (-)
XLOC_026679 sdk1a coding downstream 238710 40978997 ~ 41292569 (-)
XLOC_026678 cyp3c1 coding downstream 554697 40969242 ~ 40976582 (-)
XLOC_026677 cyp3c3 coding downstream 565683 40958870 ~ 40965596 (-)
XLOC_026683 BX324110.1 coding upstream 93844 41629605 ~ 41715690 (-)
XLOC_026684 grifin coding upstream 248781 41784542 ~ 41795917 (-)
XLOC_026685 ttyh3a coding upstream 419597 41955358 ~ 42086648 (-)
XLOC_026686 nudt1 coding upstream 585405 42121166 ~ 42125655 (-)
XLOC_026687 NA coding upstream 647592 42183353 ~ 42205112 (-)
XLOC_026671 NA non-coding downstream 753556 40774418 ~ 40777723 (-)
XLOC_026666 NA non-coding downstream 1125893 40396063 ~ 40405386 (-)
XLOC_026659 NA non-coding downstream 1349625 40180136 ~ 40181654 (-)
XLOC_026688 BX005183.3 non-coding upstream 676949 42212710 ~ 42216013 (-)
XLOC_026689 NA non-coding upstream 836023 42371784 ~ 42373599 (-)
XLOC_026690 NA non-coding upstream 1013183 42548944 ~ 42746784 (-)
XLOC_026691 CABZ01079183.1 non-coding upstream 1330322 42866083 ~ 42866200 (-)

Expression


Co-expression Network