trnap-agg-111


Basic Information

Item Value
gene id trnap-agg-111
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36557328 ~ 36557399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-111
ggctcgttggtctaggggtatgattcttgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-111 True 72 mRNA 0.58 1 36557328 36557399

Neighbor

gene id symbol gene type direction distance location
trnap-agg-110 NA coding upstream 1332 36555925 ~ 36555996 (+)
trnap-agg-109 NA coding upstream 2563 36554694 ~ 36554765 (+)
trnap-agg-108 NA coding upstream 3794 36553463 ~ 36553534 (+)
trnap-agg-107 NA coding upstream 5197 36552060 ~ 36552131 (+)
trnap-agg-106 NA coding upstream 6017 36551240 ~ 36551311 (+)
trnap-agg-112 NA coding downstream 1332 36558731 ~ 36558802 (+)
trnap-agg-113 NA coding downstream 2563 36559962 ~ 36560033 (+)
trnap-agg-114 NA coding downstream 3794 36561193 ~ 36561264 (+)
trnap-agg-115 NA coding downstream 5197 36562596 ~ 36562667 (+)
trnap-agg-116 NA coding downstream 6600 36563999 ~ 36564070 (+)
G799219 NA non-coding upstream 18829 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 20846 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 33664 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 62276 36476096 ~ 36495052 (+)
G799201 NA non-coding upstream 109238 36446401 ~ 36448090 (+)
G799221 NA non-coding downstream 5993 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 53468 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 73892 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 82431 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 87911 36645310 ~ 36645631 (+)
G799053 NA other upstream 240523 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1185180 35364988 ~ 35372148 (+)
G797056 NA other upstream 2000706 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2435588 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3969940 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 477019 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1009846 37567245 ~ 37570411 (+)
G800834 NA other downstream 1512817 38070216 ~ 38071433 (+)
G801778 NA other downstream 2230662 38788061 ~ 38788354 (+)
G801851 NA other downstream 2375553 38932952 ~ 38933868 (+)

Expression


Co-expression Network