trnap-agg-118


Basic Information

Item Value
gene id trnap-agg-118
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36566461 ~ 36566532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-118
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-118 True 72 mRNA 0.60 1 36566461 36566532

Neighbor

gene id symbol gene type direction distance location
trnap-agg-117 NA coding upstream 1160 36565230 ~ 36565301 (+)
trnap-agg-116 NA coding upstream 2391 36563999 ~ 36564070 (+)
trnap-agg-115 NA coding upstream 3794 36562596 ~ 36562667 (+)
trnap-agg-114 NA coding upstream 5197 36561193 ~ 36561264 (+)
trnap-agg-113 NA coding upstream 6428 36559962 ~ 36560033 (+)
trnap-agg-119 NA coding downstream 1156 36567688 ~ 36567759 (+)
trnap-agg-120 NA coding downstream 2383 36568915 ~ 36568986 (+)
trnap-agg-121 NA coding downstream 3775 36570307 ~ 36570378 (+)
trnap-agg-122 NA coding downstream 5164 36571696 ~ 36571767 (+)
trnap-agg-123 NA coding downstream 6557 36573089 ~ 36573160 (+)
G799219 NA non-coding upstream 27962 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 29979 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 42797 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 71409 36476096 ~ 36495052 (+)
G799201 NA non-coding upstream 118371 36446401 ~ 36448090 (+)
trnap-agg-149 NA non-coding downstream 44335 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 64759 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 73298 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 78778 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 79152 36645684 ~ 36646031 (+)
G799053 NA other upstream 249656 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1194313 35364988 ~ 35372148 (+)
G797056 NA other upstream 2009839 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2444721 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3979073 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 467886 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1000713 37567245 ~ 37570411 (+)
G800834 NA other downstream 1503684 38070216 ~ 38071433 (+)
G801778 NA other downstream 2221529 38788061 ~ 38788354 (+)
G801851 NA other downstream 2366420 38932952 ~ 38933868 (+)

Expression


Co-expression Network