trnap-agg-130


Basic Information

Item Value
gene id trnap-agg-130
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36582840 ~ 36582911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-130
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-130 True 72 mRNA 0.60 1 36582840 36582911

Neighbor

gene id symbol gene type direction distance location
trnap-agg-129 NA coding upstream 1322 36581447 ~ 36581518 (+)
trnap-agg-128 NA coding upstream 2715 36580054 ~ 36580125 (+)
trnap-agg-127 NA coding upstream 4108 36578661 ~ 36578732 (+)
trnap-agg-126 NA coding upstream 5501 36577268 ~ 36577339 (+)
trnap-agg-125 NA coding upstream 6894 36575875 ~ 36575946 (+)
trnap-agg-131 NA coding downstream 1322 36584233 ~ 36584304 (+)
trnap-agg-132 NA coding downstream 2724 36585635 ~ 36585706 (+)
trnap-agg-133 NA coding downstream 4126 36587037 ~ 36587108 (+)
trnap-agg-134 NA coding downstream 5528 36588439 ~ 36588510 (+)
trnap-agg-135 NA coding downstream 6930 36589841 ~ 36589912 (+)
G799219 NA non-coding upstream 44341 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 46358 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 59176 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 87788 36476096 ~ 36495052 (+)
G799201 NA non-coding upstream 134750 36446401 ~ 36448090 (+)
trnap-agg-149 NA non-coding downstream 27956 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 48380 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 56919 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 62399 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 62773 36645684 ~ 36646031 (+)
G799053 NA other upstream 266035 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1210692 35364988 ~ 35372148 (+)
G797056 NA other upstream 2026218 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2461100 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3995452 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 451507 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 984334 37567245 ~ 37570411 (+)
G800834 NA other downstream 1487305 38070216 ~ 38071433 (+)
G801778 NA other downstream 2205150 38788061 ~ 38788354 (+)
G801851 NA other downstream 2350041 38932952 ~ 38933868 (+)

Expression


Co-expression Network