XLOC_026688 (BX005183.3)



Basic Information


Item Value
gene id XLOC_026688
gene name BX005183.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 42212710 ~ 42216013 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00051980
TTTTTTCCACACAATCACCACCCACCCTGGACCACATAAGTGCCATTTGAGGGTCCTGAGATGTCGACTGGGGCCCCCTCTCCCGAGGAGGCAATTTGTTGACAGTTAACAGTGCTTCCCATGAAATGAGAGCCCATGGTCTGGTTATAACACACAGGGTGTGTAATAGAGTGGTTAATAAAAACCTTGTGGCTAATAGGTGAGGGTTTAGCATGGCCAAATTTTACCCAAAATAGAGCATCACATGTACCATTTCTAATGCCAATCCGGTATGGATCGTAGTCATCGACAATTATATATATGGGTCCTGGTACCCTGATCCTgcaaaactggcaaaacataTAGCAGCTGTTTTATTCATGGGTTTAGCATAAAGAGGGGTTTGCTTGGCTGAATGAGGCATAACAGAACATACATAACAACCAGATACATTATATGACCTAGCTAAAACTTTCACATATTGATACCACATATTATTTCAATTGGATTGTCAGCCCCATCCTCTGCCCATCCAAATTCATGATCATGTGTCCAGCGTTTCAGCCTGGCTGCATTAGCTTGAGCAACAAGAAAGAGAAACAGTCCAATTGTCCGCAGCAAAAAGGAAGTCATGCTGACCCTTGCCTTAAGGTAGACAGTGCTACGTGTTTAGCTCCCATCTGTCTCCCAAACGCAATTGTGCAGCTgtcgacccggagacatgagaagagaccaaactgtagttagaatggtttattctgcaagccTGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097610

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00051980 True 749 lncRNA 0.44 2 42212710 42216013

Neighbor


gene id symbol gene type direction distance location
XLOC_026687 NA coding downstream 7598 42183353 ~ 42205112 (-)
XLOC_026686 nudt1 coding downstream 87055 42121166 ~ 42125655 (-)
XLOC_026685 ttyh3a coding downstream 126062 41955358 ~ 42086648 (-)
XLOC_026684 grifin coding downstream 416793 41784542 ~ 41795917 (-)
XLOC_026683 BX324110.1 coding downstream 497020 41629605 ~ 41715690 (-)
XLOC_026689 NA coding upstream 155771 42371784 ~ 42373599 (-)
XLOC_026690 NA coding upstream 332931 42548944 ~ 42746784 (-)
XLOC_026691 CABZ01079183.1 coding upstream 650070 42866083 ~ 42866200 (-)
XLOC_026692 BX908797.1 coding upstream 702130 42918143 ~ 42968544 (-)
XLOC_026693 mafk coding upstream 748032 42964045 ~ 42981739 (-)
XLOC_026681 BX537310.2 non-coding downstream 700500 41396123 ~ 41512210 (-)
XLOC_026680 CR769786.1 non-coding downstream 900567 41312022 ~ 41312143 (-)
XLOC_026671 NA non-coding downstream 1434987 40774418 ~ 40777723 (-)
XLOC_026666 NA non-coding downstream 1807324 40396063 ~ 40405386 (-)
XLOC_026694 NA non-coding upstream 808808 43024821 ~ 43026735 (-)
XLOC_026695 NA non-coding upstream 971181 43187194 ~ 43189085 (-)

Expression



Co-expression Network