trnap-agg-139


Basic Information

Item Value
gene id trnap-agg-139
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36595449 ~ 36595520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-139
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-139 True 72 mRNA 0.60 1 36595449 36595520

Neighbor

gene id symbol gene type direction distance location
trnap-agg-138 NA coding upstream 1331 36594047 ~ 36594118 (+)
trnap-agg-137 NA coding upstream 2733 36592645 ~ 36592716 (+)
trnap-agg-136 NA coding upstream 4135 36591243 ~ 36591314 (+)
trnap-agg-135 NA coding upstream 5537 36589841 ~ 36589912 (+)
trnap-agg-134 NA coding upstream 6939 36588439 ~ 36588510 (+)
trnap-agg-140 NA coding downstream 1331 36596851 ~ 36596922 (+)
trnap-agg-141 NA coding downstream 2733 36598253 ~ 36598324 (+)
trnap-agg-142 NA coding downstream 4133 36599653 ~ 36599724 (+)
trnap-agg-143 NA coding downstream 5535 36601055 ~ 36601126 (+)
trnap-agg-144 NA coding downstream 6937 36602457 ~ 36602528 (+)
G799221 NA non-coding upstream 10134 36563392 ~ 36585315 (+)
G799219 NA non-coding upstream 56950 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 58967 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 71785 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 100397 36476096 ~ 36495052 (+)
trnap-agg-149 NA non-coding downstream 15347 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 35771 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 44310 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 49790 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 50164 36645684 ~ 36646031 (+)
G799053 NA other upstream 278644 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1223301 35364988 ~ 35372148 (+)
G797056 NA other upstream 2038827 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2473709 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4008061 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 438898 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 971725 37567245 ~ 37570411 (+)
G800834 NA other downstream 1474696 38070216 ~ 38071433 (+)
G801778 NA other downstream 2192541 38788061 ~ 38788354 (+)
G801851 NA other downstream 2337432 38932952 ~ 38933868 (+)

Expression


Co-expression Network