trnap-agg-143


Basic Information

Item Value
gene id trnap-agg-143
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36601055 ~ 36601126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-143
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-143 True 72 mRNA 0.60 1 36601055 36601126

Neighbor

gene id symbol gene type direction distance location
trnap-agg-142 NA coding upstream 1331 36599653 ~ 36599724 (+)
trnap-agg-141 NA coding upstream 2731 36598253 ~ 36598324 (+)
trnap-agg-140 NA coding upstream 4133 36596851 ~ 36596922 (+)
trnap-agg-139 NA coding upstream 5535 36595449 ~ 36595520 (+)
trnap-agg-138 NA coding upstream 6937 36594047 ~ 36594118 (+)
trnap-agg-144 NA coding downstream 1331 36602457 ~ 36602528 (+)
trnap-agg-145 NA coding downstream 2733 36603859 ~ 36603930 (+)
trnap-agg-146 NA coding downstream 4135 36605261 ~ 36605332 (+)
trnap-agg-147 NA coding downstream 6939 36608065 ~ 36608136 (+)
trnap-agg-148 NA coding downstream 8341 36609467 ~ 36609538 (+)
G799221 NA non-coding upstream 15740 36563392 ~ 36585315 (+)
G799219 NA non-coding upstream 62556 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 64573 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 77391 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 106003 36476096 ~ 36495052 (+)
trnap-agg-149 NA non-coding downstream 9741 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 30165 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 38704 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 44184 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 44558 36645684 ~ 36646031 (+)
G799053 NA other upstream 284250 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1228907 35364988 ~ 35372148 (+)
G797056 NA other upstream 2044433 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2479315 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4013667 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 433292 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 966119 37567245 ~ 37570411 (+)
G800834 NA other downstream 1469090 38070216 ~ 38071433 (+)
G801778 NA other downstream 2186935 38788061 ~ 38788354 (+)
G801851 NA other downstream 2331826 38932952 ~ 38933868 (+)

Expression


Co-expression Network