LOC110532001 (LOC106571910)


Basic Information

Item Value
gene id LOC110532001
gene name LOC106571910
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37628778 ~ 37634142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615572.2
TTTCTCCACTGTCAACTACATTTCCTCTGCATCGGAATGGCAAAAAGGAGAACGTGTTCCAACTAGTGCGATTGTCAGTGTAGAAAGTTGATCGTATATTTAATGTCTGGTGTTATTATTTCACAGGGGGGAAATGTACTAGTATTTGCTTCCCTGGGCGAGTGGATAAGTGGTGAGTAACCTACAAGGTCAGATGGACATTGGAGTAGGGAAATCAACGCTCCCGCTCTAAAGAAAGTGATACATTAGAAGTATGTCATTATCGCAACATTTGAGATTTGATGTTTGAAGTTAACACGTTACAGTGTTTGCCCTGCGAAGTTAGCCGCCACTCGGTGTACAATGTAGCGACATTTGTGTGTTACTTGCATGAATGTAACATGATATTTCGTTCGATATGACTAATGTGACGCCGAGTAAAAGCGTGGAATGGCTGCAGGTAGAGTTGGAATCCGGGGGAAGTTCGCTGCTTCTGTTGGACTGCCGATCGCACGAACTTTATGAATCATCCCACATAGAAACGGCCATCAATTTGGCCATACCAGGGTTGATGCTGCGAAGGTTCAAGAAAGGCAACATACCCATCCGAACTATCATCCCCAACCACGAAGACAAGGAGAAATTCGTTAGACGTTGTAATACGGATACAGTGATTCTGTACGATGAGTGCACTGTGGACTGGCAGGATGGGGCCACTGGTTCGGTTCTGGGACTACTTCTTCAGAAACTATGGGACGACGGCTGTAAAGCATATTACCTGGAAGGGGGATTTGTGAAGTTTCAGACCGAGTACTCGGAGCACTGTGAGACCCTTCTGGACAGCTGCTGTCCCAGCTCTTCTCCACCGCTGTCCGTCCTAGGCTTTGGAAGTCTCCGGATCAGTTCCGACCTCTCCGATGGTGAGTCGGACCGCGAGCCGAGCAGTGCGACCGAGTCTGAGGAGAGCCCCCTTCCCAACAACCAACCTGCCTTCCCAGTCCAGATCCTCCCCTACCTTTACCTGGGCTGTGCCAAAGACTCAACCAACCTGGATGTGCTGGGCCAGTACAACATCAAGTACATCCTGAACGTCACGCCCAACCTCCCCAACATGTTTGAACATGACGGCCTCTTCAAGTACAAGCAGATCCCCATCTCCGACCACTGGAGTCAGAACCTGTCCCAGTTCTTTCCAGAGGCCATATCCTTCATCGATGAGGCTCGGTCCAAGCAGTGTGGCGTCCTGGTACACTGTCTGGCTGGCATCAGCCGCTCCGTTACCGTGACCGTGGCCTACCTGATGCAGAGGCTCAACCTGTCACTCAATGACGCCTACGACTTTGTCAAGAGGAAGAAGTCCAACATCTCCCCCAACTTCAACTTCATGGGCCAGCTGCTGGACTTTGAGAGGACACTGGGGCTAAACAGCCCATGTGACAACCGCTCCTCGTCCAATGAGCAGCTCTACTTCACCACACCGACCAATCACAATGTGTTCCAGCTGGACACGCTGGAGTCAACGTGAGGAAACGGAGAAGACTGGTTTGGTGGCCATGTTGTTTCATCAGTGTCGCCAGGGTATTTTGTAGCCTGTCAATGAAAAAGAAAATGCACCTGGCACTCCAGCTTGTGGAGACTGAGAAGACTCACCTGTCAAGCAAGTGATTTCAGTATGGATTTTCATAGAACATGGTGCCCGCCATTATGCTTAAAACAGTACATGCTCTGTCTGATGCCttaagggatacttcgggattttggcaacaaggccctttatctacttcccccagagtcagatgaacgtgtggataccatgtttatgtctctgtgtcaagTATGAGGGAAGTTAGAGGAAGTTTTGTGAACCAATGCTAACCATAGACTTTCAGTAATTGCGCTaccgctagttagcaacttccttcaaactgtacgcagagacatacaaatggtatggacgagttcatctgactctggggaagtccCAAAATTCAGAAGTATCCCTTTTAATGTTTTACTCAAGTAATCCAACAGGCTTAGTGTGTATAATAGTGAATGGTGGTTTGCAATGGTTATTGCAAGAAATGTAATTATTATGAGGTAACtcgattgggggggggggactgttatTTCATATTCACCCGCTGGAAAGTGGATGTGTCAAGTTGTTTTCAGAACAACTGTGGCTAATGCCTTGTTCTGAAGGGAGTAGTTGGCCAAGCAGAATGTGAATCATTGTTTTCTGGGACCAAACTGAGATATTTTGAATGGTACTCTTGCTGAGGGGCCTGGGCTACTTTAGGTTGGCCTTGAACGACTTTGTAACATTCCTATTGATGACTGTTCTAGATGTCGTCATTTGCAGTTAACATCAGAAGGGAGTGATCATTGAAAGCACTTGTCCGCCAATGTTATGTTCTCTACTTTGCTGTCATCTTCAAAGTAAACATTTAGTTTTTTTCTATTCCATAATGTAAGAACGCCGTACATTATGTTAGTTTTTCCTTTGTTGAATGGAGAGGGTCACCCTCTTGCAAAATATTAAAGATGAaacacattattttttttattttttttgcaaagcTCTTGTAAATTGTGGTAATTATAATAACATTGCATTGTTTGCATGTAATCAAGTTTAACTTCTGTATACTGTACCTCTTATGCCTGTTGTTCCTGTGGCCTTTCCGATACCCTCTAAGTTAACACTTAACTCTCTTTAACCAAGGAACTGGGTATGGTATTGGATTGTCATTTGCCATGCTTGCCATGAATGACTTGTATATCGAAGTTATGATCCATAATGGACATTTTTACCTTGTTTATTAAGTCATGTAACAGTCACGTATAGACACAATCTTCAgcctgcagctactcttcctgtggcgGAACCATGTTAAAGGAAACACAGTGTGTTTTGATCTGTTCTGTATTTGCCAGTAATCGAAGTTGAATGTTTCagcgaatgagagagagagagacggaatgAAAGGAAACGCGTGATAATGATGCCAATTTTTTTTTGCTTACCTCACGGAGAGACATTTTCAGGGATTTTATATACAGCACATCTGTATCTTGTTACGGCATCTGAAACGCATCAGAGGGCTGTGTTTATTTGGTATGGGTTTGTAAAAGATGTACATAAGATTCGCTTGGTAACGGGTGACCTTTTCTCTGAATCATGAAGGATGTGAAATTGACCgattacagtatgtacagtatgtaaaacTAAATGTACAAGACATTTATGTACAAGTTTATACAACAAATATATTGTGTATATTTTTTACTTTCAAA

Function

NR:

description
dual specificity protein phosphatase 7-like

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615572.2 True 3276 mRNA 0.44 3 37628778 37634142

Neighbor

gene id symbol gene type direction distance location
LOC110531998 LOC106571908 coding downstream 46974 37567212 ~ 37581804 (-)
LOC110531996 LOC100136520 coding downstream 152229 37441559 ~ 37476549 (-)
LOC100505416 pparg coding downstream 192584 37429893 ~ 37436194 (-)
cnbpa cnbp coding downstream 251490 37373220 ~ 37377288 (-)
LOC110531992 LOC106571904 coding downstream 255895 37365677 ~ 37372883 (-)
LOC110531161 NA coding upstream 4270 37638412 ~ 37641906 (-)
LOC110532003 LOC106571912 coding upstream 95848 37729990 ~ 37770397 (-)
LOC110531162 LOC106571919 coding upstream 314598 37948740 ~ 37953210 (-)
LOC110531163 LOC102784363 coding upstream 319468 37953610 ~ 37961387 (-)
LOC110532008 LOC106571920 coding upstream 326997 37961139 ~ 37977349 (-)
G800438 LOC106571909 non-coding downstream 18483 37605242 ~ 37610295 (-)
G800436 NA non-coding downstream 64687 37563878 ~ 37564091 (-)
G800416 NA non-coding downstream 101688 37526742 ~ 37527090 (-)
G800389 NA non-coding downstream 102348 37477727 ~ 37526430 (-)
G800411 NA non-coding downstream 112346 37513149 ~ 37516432 (-)
G800503 NA non-coding upstream 54018 37688160 ~ 37746372 (-)
G800553 NA non-coding upstream 137778 37771920 ~ 37772129 (-)
G800558 NA non-coding upstream 149864 37784006 ~ 37784304 (-)
G800559 NA non-coding upstream 150318 37784460 ~ 37785145 (-)
G800318 NA other downstream 283631 37344395 ~ 37345147 (-)
LOC110531982 LOC106571893 other downstream 721130 36827882 ~ 36907700 (-)
G798993 NA other downstream 1478141 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 1649663 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 2107446 35492026 ~ 35521884 (-)
LOC110532015 LOC106566767 other upstream 1207067 38839265 ~ 38841685 (-)
G802100 NA other upstream 1332314 38966456 ~ 38996032 (-)
G802138 NA other upstream 1416388 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 1440339 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 1746608 39380750 ~ 39383210 (-)

Expression


Co-expression Network