LOC110531161


Basic Information

Item Value
gene id LOC110531161
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37638412 ~ 37641906 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110531161
ATGGTAGAGTCAGAGCAGGTGGTCCAGCTACCCCCGGGCCACCCAATGCCCCATCCTGGCCAGCCGGTGTGCTCCAAATTCCCCGTCCTGGTGGCTGAAATGGTGCAGAAGAACACCAACGTGGTGAGGGAGGCCCGCATCGAGCTGTCAGAGGAAATACAGGACAGGAGTACAGTCTACACAGGTAAGAATGCGAGCGGTCTTTGACCTTTTCCACTCAGTTGTGTAAATGCTGACAGGGCCGACCCAGGCACCCTGAAGAACATGCTGAAACAGCGCCCCCCTAAGGTCTCTCACTTACTACGAGACAACCTGCACGAAGCGTGTGCCAACTTCCACTACCACAAGTTCTTCGAGAAGAAGATTGACACCAGGAAGAAAGATCACAGCTACCGGATGTTTACTACGGTGAAAGGGCGCGCCAAGTCCTTCCCCATGGCAGACAACTGCTCAGAGTCGCTTCTCATGAAGAGAGACGTGTCTGTGTGGTGCAGCAATGACGACCTGGGCATGAGCCGGCGACCCAGAGCCTTTCAGGCCATCATGGCGCTTGGTTTAGTTGGCGGCTACATCGTCGGTACCAATGCCCTGGTGCCCTGGTGCCCTGGTGGACACTGTGTGCTCCTACGCAGTAGGCTTCATCTTCACCTCGCTGCCCCCCATGCTGTTGGCCTTGGCCCGGGAGTCCATCCAGACCCTGAATGGGGAGGAGGGCCGCGTGCTGCGCAGGAAACACCAGAGGAACATCAAGCTGCTGCACCAGATGCTGATGGACTCAGTCCACGGTCCACTGCCCCAGCCACATCATCCCTGTCAGGGTGGTGGACCCTGCGAAGAATACAGAGGTGTGTGACATCATGATGTCTCGCTACCACATCTACGTGCAAGACATCAATTACCCCATGGTGGCCCGGGGAGAGGAGGGCCTCCGCATCGCCCCCACCACACATCACACCCCAGATAATGCAGTACTTTTTCGAGCATCTGGTGAAGGCCTGGAAGGAGGTAGGTCTGGAGCTGAAGCTTCACTCGTCAGGGGAGTGTAACTTCTGCCAGCAGCCGCTAGATTTTGAgctgatgacagagagagagaagtcatcgGCATGAGTAACATGATATCGGCCAGGGCCTAA

Function

NR:

description
PREDICTED: 5-aminolevulinate synthase, nonspecific, mitochondrial-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110531161 True 1133 mRNA 0.57 6 37638412 37641906

Neighbor

gene id symbol gene type direction distance location
LOC110532001 LOC106571910 coding downstream 4270 37628778 ~ 37634142 (-)
LOC110531998 LOC106571908 coding downstream 56608 37567212 ~ 37581804 (-)
LOC110531996 LOC100136520 coding downstream 161863 37441559 ~ 37476549 (-)
LOC100505416 pparg coding downstream 202218 37429893 ~ 37436194 (-)
cnbpa cnbp coding downstream 261124 37373220 ~ 37377288 (-)
LOC110532003 LOC106571912 coding upstream 88084 37729990 ~ 37770397 (-)
LOC110531162 LOC106571919 coding upstream 306834 37948740 ~ 37953210 (-)
LOC110531163 LOC102784363 coding upstream 311704 37953610 ~ 37961387 (-)
LOC110532008 LOC106571920 coding upstream 319233 37961139 ~ 37977349 (-)
LOC110532012 cdh4 coding upstream 410809 38052715 ~ 38440830 (-)
G800438 LOC106571909 non-coding downstream 28117 37605242 ~ 37610295 (-)
G800436 NA non-coding downstream 74321 37563878 ~ 37564091 (-)
G800416 NA non-coding downstream 111322 37526742 ~ 37527090 (-)
G800389 NA non-coding downstream 111982 37477727 ~ 37526430 (-)
G800503 NA non-coding upstream 46254 37688160 ~ 37746372 (-)
G800553 NA non-coding upstream 130014 37771920 ~ 37772129 (-)
G800558 NA non-coding upstream 142100 37784006 ~ 37784304 (-)
G800559 NA non-coding upstream 142554 37784460 ~ 37785145 (-)
G800318 NA other downstream 293265 37344395 ~ 37345147 (-)
LOC110531982 LOC106571893 other downstream 730764 36827882 ~ 36907700 (-)
G798993 NA other downstream 1487775 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 1659297 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 2117080 35492026 ~ 35521884 (-)
LOC110532015 LOC106566767 other upstream 1199303 38839265 ~ 38841685 (-)
G802100 NA other upstream 1324550 38966456 ~ 38996032 (-)
G802138 NA other upstream 1408624 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 1432575 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 1738844 39380750 ~ 39383210 (-)

Expression


Co-expression Network