LOC110517304 (LOC106571911)


Basic Information

Item Value
gene id LOC110517304
gene name LOC106571911
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37666342 ~ 37717107 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987918.1
CAAAGTTTGCTCGCTGAGCTCGGCTCATCGCACTTGCTGCAACACGTCTTGTCAACCTCGCACTTTACGCGTGAACCAGGGAGACAGTGATAGTGAAAGGGGTCGGAGTAGCTGGATGTAAAGGGCACAGGATCGACATTTAAAATTGTGCAGATCCGTGAATTTAAGGCAAGCCAATAAAAGTGGACGTTGAAGTGAAATTGATGTTGCAATCGGGAACTCTTCCCTCAACATGAGGGACCGTCAATGATACGGGTATTGAACAAACCTGTTGCGAAGTTCAATGTCCTTGTTCTAAGTCTTGGGTGAGAGCACTCAGCGCAATTACGCACGGCATCATTATGGTTTTATTTTTGGATAGACGTGTCCCTGCTTTGTTCCTACTTTGGGGCTACTGCGTTTTTGCGGACACGGTCTTTTCGAACTTTACCCTGGACAACGAGGTCCACTCCAGTTTCATCCACCGGCGGCTGAAGAGCCAGGAGCGCCGGGAGATGCAGCGGGAAATCCTCTCGATCCTCGGGCTACCGCACCGGCCACGGCCGCATCTCCACGGGAAGCACAACGCGGCACCGATGTTCATGCTGGACCTGTACAATGCCATGTCCACAGAGGGGAAAGAGGATGGGTACTCCTACCCATACAAACCCATCTTCACCACCCAGGGGCCGCCGATAGCCACTCTTCAGGACAACAACTTCCTAAACGACGCAGACATGGTTATGAGCTTTGTCAATTTAGTGGAACACGATACAGAGCTCCTACCCGTCCGACGGCACCACCGAGAGTTCCGTTTCGACCTATCACGTATTCCTGAGGGGGAAGCGGTCACCACTGCAGAGTTCCGCATCTATAAGGACTTCATCCACGAACGCTTTGACAATGAAACCTTCCGCATCAGTGTCTACCAGGTGCTGGAGGAAAACATTGAcagGGAGTCAGACCTGTTTCTGTTGGACTCGAGGGTCATCTGGGCGGCTGAGGACGGCTGGCTGGTGTTTGACTTGACAGTGACCAGTAACCAATGGGTCTTGAACCCTGGACACAACCTGGGCCTGCAGCTGGCTCTGGAGAGCACTGACGGTGTGAGTGTGAACCCGCGGTTGGCAGGGCTGGTCGGCCGCAGTGGTCCTCAGAATAAACAGCCCTTCATGGTGGCCTTCTTCAAAGCCACCGAGGTGCACCTGCGCAGCATCCGATCAGCAACAGGGGGCACCAAACAACGCAACCCCAACCGCTCCAAAGGGGCCAACAAGGGCCAGGAGGCACTCCGAGTGGCCAACATTGCAGagaACAGCAGTGCTGATCAGAAGCAGGCGTGTAAGAAACACGAGCTCTACGTCAGCTTCAGAGATCTGGGGTGGCAGgactggATCATAGCTCCAGAGGGCTATGCAGCATACTACTGTGAGGGAGAGTGTGCCTTCCCTCTCAACTCCTATATGAACGCCACCAACCATGCCATCGTGCAGACACTAGTCCACCTAATAAACCCAGACACCATTCCTAAGCCCTGCTGTGCCCCAACCCAGCTCCATGCCATCTCGGTGCTCTACTTTGACGACAGCTCCAATGTCATCCTCAAGAAGTACCGCAATATGGTGGTCAGAGCCTGTGGCTGCCATTAGACTACAGCCAAcctctcaacacacacaaacacacacactcacgcacacatcTAAATATCCCTCAACGCAGGTCACTTTCATCGAGACTCTAGACTTTCTTCCCCAGATTCACCTGAATGGACACATGAATGGACTGcatttcccagagtgccttgctGAGCTCCTGGACGGGAGCTACATGAGGACCGGGCAGACAATCATGCTTATTGAGTTCaacatggaacacacacacacacatacttcctGTGCTTTCTACTGTGTATGAGACATTTTAAACAGTGATTGTATAGTAATACACAGTCAACAATCTTTTgttcatttaaatgtttttttattgtatttcactCTGTTTTTCTAGATATTTTTGATCAATTACGTATTTGTATGTTTTTTATGACTGAAAGGCTATAGGAAGTGTGGATGCTCTATGGACTCTTCATGGACCATACTGTGTAAATAGTTTTTTAAACAAAGAGAATTGTATTTATTTCCTGGTCTTGGGCATGTTAAGGgtttttctcctgtctctctctctctctctctctctctctctctctctctctctctctctctctcgctctttctctctcttcctcctctgtttctcacCATGCTAGCTCAGAGATTTGTTTTTCCTGCACAGTAACAGTGCTGAATCTATCATCAGTATGGACCTATCACTACAGCCTTGTCATGGGGAATAACTCAGCCTGTTCCTCTCCTTATTCCAAACATTGTCTTAAAGACATAAAAGTTATTTTCAGAATGAAAATacattcatatactgtagctcttTTTATAAACTAGACTTTgactttaatgtttttttttacaataaaaa

Function

NR:

description
PREDICTED: bone morphogenetic protein 7-like

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K16621 BMP7; bone morphogenetic protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987918.1 True 2469 mRNA 0.49 7 37666342 37717107

Neighbor

gene id symbol gene type direction distance location
tnnc1a LOC106571909 coding upstream 56168 37605201 ~ 37610174 (+)
LOC110531997 LOC106571907 coding upstream 149424 37510543 ~ 37516918 (+)
raf1a LOC106571905 coding upstream 242066 37379949 ~ 37424276 (+)
gp9 LOC106571903 coding upstream 301494 37362028 ~ 37364848 (+)
iqsec1a LOC106571902 coding upstream 306326 37179890 ~ 37360016 (+)
LOC110532004 LOC106571913 coding downstream 3959 37721066 ~ 37729844 (+)
LOC110532006 LOC106571916 coding downstream 146573 37863680 ~ 37905930 (+)
LOC110532007 LOC106571918 coding downstream 206765 37923872 ~ 37948962 (+)
LOC110532009 LOC106571922 coding downstream 260317 37977424 ~ 37979829 (+)
LOC110532011 LOC106571923 coding downstream 304574 38021681 ~ 38033223 (+)
G799895 LOC105029132 non-coding upstream 35490 37628854 ~ 37630852 (+)
G799863 NA non-coding upstream 83707 37582177 ~ 37582635 (+)
G799837 NA non-coding upstream 135879 37530017 ~ 37530463 (+)
G799789 NA non-coding upstream 219920 37445144 ~ 37446422 (+)
G799785 NA non-coding upstream 227399 37438691 ~ 37438943 (+)
G799983 NA non-coding downstream 66218 37783325 ~ 37783538 (+)
G799984 NA non-coding downstream 66901 37784008 ~ 37784214 (+)
G799985 NA non-coding downstream 67322 37784429 ~ 37784956 (+)
G800563 NA non-coding downstream 79513 37796620 ~ 37796857 (+)
G800566 NA non-coding downstream 83056 37800163 ~ 37800448 (+)
G799858 LOC106571908 other upstream 95931 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 630424 37034418 ~ 37035918 (+)
G799053 NA other upstream 1349537 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2294194 35364988 ~ 35372148 (+)
G797056 NA other upstream 3109720 34555931 ~ 34556622 (+)
G800834 NA other downstream 353109 38070216 ~ 38071433 (+)
G801778 NA other downstream 1070954 38788061 ~ 38788354 (+)
G801851 NA other downstream 1215845 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1351265 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 other downstream 1515958 39111355 ~ 39237408 (+)

Expression


Co-expression Network