LOC110532015 (LOC106566767)


Basic Information

Item Value
gene id LOC110532015
gene name LOC106566767
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38839265 ~ 38841685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615596.2
GTGAATCCACGTAGCCTATCCTTAGGGACTTGGTGTGCATTTTGTTTGAAGGGGAAAAGAACACAACGTACTgcacattccattccattcactttCTCTCGTATCCGTTTGCGCCTCCTTCCAACACCACCACTGCTGCTGGATTCTACGCAACAGCCAGAGGGGGCGAAAGAGGTGGACAACAGTGagcaccactaccacctgtaAGGGTGCGTCTGCTCTCTCAGAGATCCGGCTGAGTGTTTCGGCTCCGAGGGCTTGAAGATGAAGAAGCAGAATGTGCGgaccctctctctcatcctctgcaTGTTTTCCTACCTGCTGGTGGGAGCCGCGGTGTTCGACGCGCTTGAATCAGAGACGGAGAGCTCCCGCCGACGCATCCTGGAGCTGAAGCGTACCGAGATGAAGAAGAAATACCGGTTGTCCGAGGACGACTACCGGCAGATCGAGCAGGTGGTACTGCAAGCGGAGCCCCACCACGCCGGGAGACAGTGGAAATTCGCAGGGTCTTTCTACTTTGCCATCACGGTCATCACCACCATTGGTTATGGCCATGCAGCTCCAGGCACAGATGCTGGGAAGGTCTTTTGCATGTTCTATGCTGTGCTGGGCATCCCTCTTACCCTGGTCATGTTCCAGAGCCTGGGCGAGAGGATGAACACGTTCGTTCGCTACCTCCTGCGCAGGGCCAAGCAGTGCCTGGGGTTACGGAGGACTGAGGTGTCCATGGAGAACATGGTTTCGGTGGGCTTCCTGTCCTGCATCGGCACTCTGTGTGTCGGGGCAGCAGCCTTCTCCCACTACGAGGGCTGGACCTTCTTCCACGCCTACTACTACTGCTTTATCACGCTCACCACCATTGGGTTTGGGGACTTTGTGGCACTGCAGAAGAAGGAGGACCTCCAGGAGAAGACACCCTATGTGGCCTTCAGCTTCATGTACATCCTGGTGGGGTTGACAGTGATCGGAGCCTTCCTCAACCTAGTAGTGCTGCGCTTCCTCACCATGAAcacagaggatgagaggagggacgCCCAGGAGAGGGCCTCCATCAAGAGGGAGAGGGGCCTGCTTACCATGGGGCtgcatggaggagaaggaggaccaGAGCAGTGCAGAGGAGAGCTTGGGggcagggacagggggagggacAGGATGGGGCAGAGCCGCAGTCACAGCAACCTTTTCCGGCCCATGGAGGAGGGAACCAGCCGCACTAACCTCATCACCTCCCcagtggaggagcaggaggagagggacagggccAGGGGTGCACCCTGCAAGCAGAGGCTGCACTTACAGCTGCATGGCACAGGCAGACTAAAGACAGAGTCCCCCCTGGGCTCCCTGTGCTCCTGTATGTGCTACCGTCTGGGTGTGTGTGACAGCCCCCTGCCTTCCCGCAGCGAGCACCACGGGTGTAACATTAACTCTGTCTACTACAGCTCCGTCTCCTACAGGACCCAGGGCTGCTCCCCCAGGGACAACACAGGACTCTCGTCCCCAGGGAACACACTCTCGCCTCAGCACAGCTTCAAGGAGTACCCCCACTCCCGGAGGAAGTCAGTGTAGCACCACGTTGGGACAGAatctttgtttgtaaatgttggATTAATACAGTAtttcaaacatatattttgaatACACTACAGAGACAAGGTATTGCAGTACACTACAGATGCACACTCATTAGAGGATTAATTGTTGTAAATGATTGGCAGAGGCAATAGAATCTGTTTCATCACAGGAATTTTAGAACCTATTTTCCCTAATTAGATGATTACTGTGCTGCATTTCTTCTAAGGACGCAGTTAAGTTGTTCTTTCATTATAGCCACTGGAGATTTGTCTTGTGAATCAATTCACTTACCATTGTAATACTCTGTTAGTCTTTTGATTGTGCCCCAATAGTTTTTTCTCCTAGAAAGTTTATGAGAATTATCtgcattttattttttgttgttgcatgcaAATAAGAGTGAGATGCATGGTTAAGATGCACATGGCATGATAATTATGAAAATGGTTGTAATGATGCAAATTATTATATTTAggtattattattgttttttaagtagctgacacacacacacacacacacgcgcacgc
>TU912701
GGTGGACAACAGTGagcaccactaccacctgtaAGGGTGCGTCTGCTCTCTCAGAGATCCGGCTGAGTGTTTCGGCTCCGAGGGCTTGAAGATGAAGAAGCAGAATGTGCGgaccctctctctcatcctctgcaTGTTTTCCTACCTGCTGGTGGGAGCCGCGGTGTTCGACGCGCTTGAATCAGAGACGGAGAGCTCCCGCCGACGCATCCTGGAGCTGAAGCGTACCGAGATGAAGAAGAAATACCGGTTGTCCGAGGACGACTACCGGCAGATCGAGCAGGTGGTACTGCAAGCGGAGCCC

Function

NR:

description
potassium channel subfamily K member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615596.2 False 2111 mRNA 0.52 2 38839265 38841685
TU912701 True 304 TUCP 0.58 1 38841209 38841512

Neighbor

gene id symbol gene type direction distance location
LOC110532016 NA coding downstream 291218 38545204 ~ 38548047 (-)
LOC110532012 cdh4 coding downstream 398435 38052715 ~ 38440830 (-)
LOC110532008 LOC106571920 coding downstream 861916 37961139 ~ 37977349 (-)
LOC110531163 LOC102784363 coding downstream 877878 37953610 ~ 37961387 (-)
LOC110531162 LOC106571919 coding downstream 886055 37948740 ~ 37953210 (-)
LOC110532017 LOC106571931 coding upstream 154826 38996511 ~ 39019461 (-)
LOC110532021 LOC106571935 coding upstream 416803 39258488 ~ 39261833 (-)
LOC110532022 LOC106571939 coding upstream 425640 39267325 ~ 39270815 (-)
baz2a LOC106571938 coding upstream 431137 39272822 ~ 39315559 (-)
LOC110532024 ptges3 coding upstream 484301 39325986 ~ 39334154 (-)
G802007 NA non-coding downstream 48696 38790359 ~ 38790569 (-)
G802000 NA non-coding downstream 54555 38784489 ~ 38784710 (-)
G801999 NA non-coding downstream 54957 38784099 ~ 38784308 (-)
G801956 NA non-coding downstream 124412 38714612 ~ 38714853 (-)
G801692 NA non-coding downstream 165994 38671700 ~ 38673271 (-)
G802054 NA non-coding upstream 15330 38857015 ~ 38857486 (-)
G802056 NA non-coding upstream 18042 38859727 ~ 38859963 (-)
G802057 NA non-coding upstream 18590 38860275 ~ 38860506 (-)
G802069 NA non-coding upstream 44337 38886022 ~ 38886349 (-)
G802082 NA non-coding upstream 75195 38916880 ~ 38917138 (-)
G800318 NA other downstream 1494118 37344395 ~ 37345147 (-)
LOC110531982 LOC106571893 other downstream 1931617 36827882 ~ 36907700 (-)
G798993 NA other downstream 2688628 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 2860150 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 3317933 35492026 ~ 35521884 (-)
G802100 NA other upstream 124771 38966456 ~ 38996032 (-)
G802138 NA other upstream 208845 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 232796 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 539065 39380750 ~ 39383210 (-)
G802609 NA other upstream 569657 39411342 ~ 39414326 (-)

Expression


Co-expression Network