LOC110532014 (LOC106571929)


Basic Information

Item Value
gene id LOC110532014
gene name LOC106571929
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38868269 ~ 38884647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615595.2
GAAGAAGCTGCTCAGCCAGCAGACAGACATTCATTGACTGCAGACCATTTCACCCTGTCACTCATGTTTGTCGAACCCGTACTGGTACCACGAATCGCGACGATGGATTTTGCTTACCGGGAGGAGGGATGGTTGGTCGGTCGTGGTAGTCATCGAATTTAGGCCTGGAAGTTCAACTCATGTGTAATTATCTTGGCTAGCAGATTTCGCTTTTGGTCTTTCTCAAGCCCACATTGTGACATTGTGTTTTAAATGATGGAGCCGGACGATTTAGTGTGCGTGTATGATTCGACGTGGGACACCGAGAGTGATGGAGACGATCCTGGAGAGAACCAAACGCGTCGCTCAAGCCAGGACAAAACTAAATCATGGACATCTGGTTTATGGTCAAACACGTTCTCCAGGAACATGAGGGCTGCCAAGGACATGCAGAACTACAGAAAAGGGTATCCTAATCTAACAGATGACGAATGCTCAGAAGAGAGAATGTTCAATTTAAAATTCTATCTCAACGAATACCCCTCCTCCCCTGATGACATTTTCATAGAATCCTTTCATAAAGAATGGAAGACGGACTATAAGAGGCTGGAGAGAGTTCACTCCTACATTCAGTGGTTGTTTCCACTGCGGGAACCAGGAGTGAACTACATGGCCTCTGAGCTCACCAAGAAGGAGATCCTGGCCTTCAGGGAGAGTGAGGAGGCCAAGAAGAGGCTGGTGGAGTCCTACGAGCTCATGCTGGGGTTCTATGGTATCCAGCTGGTCAACAAAGACACAGGTGAGGTCAAACGCGCCGAGAACTGGAGAGAACGCTTCGCCAACCTTGAAAGGAACATGCACAACAACCTCCGCATTACGCGCATCCTGAAGAGCCTGGGGGAGCTAGGCTTTGAGCACTACCAGAGCCCATTGGTGCGCTTCTTCCTGGAGGAGACGCTGGTCAAAAGGAACCTGAGCAGCGTCAAGCGCAGCGTGCTCGACTACTTCCTGTTTGCCATTCGTGACAAGCAGAAGCGCAAAGAGCTTCTGCGCTACGCTTTCCAGCACTTTGAGCCCAAGGAAAAGTTTGTATGGTGCCCCAGAAAGATCCAGAAACAGCTGAAGAAGGCGGAGAAAGGGAACGGAGAGGGAGCGGAGGAAGGCCGCACACGAGCCAAggctagagagggagaggcagtggGAGCCCAGAAGGACAAGGGTGTCacggaggaggtgaaggagactACCAAGTTGAATGATGAAGCATTGAGTAGTGATGGCGATAAGCAGGCTGAAGGTTTTTCTGTTAATCCTTCAGGGACAGCAATCTCCTCAGAGGACTCAGAATCACTGGGAAACGGGAACAGTAATGATCTTGATATGGACCATTCAGGCAGCCCAGACCCTGAGTCTGTTAAAGGAGATCACAGTATGGAGGAAGGACTCAAAGAGGATAGTCAAGCCAAGGACAGCGTCCAGGACTCAGTTAAAGTCAAGGCAGCTGCATCTGAAATGAAGTCCGATAATTTGCCGCAACCGACTAAGAAGAAAAGGGAAGGTGACACGGTGGTGACACGCAACGGTCCTTCAGAGAACTGCCCCAACGGGTGGGAGAAAGGCACAGGCGTCCCTAACGACAACCACCCGCATCAGACGAGCCCATCAGCGGCATCATCCCACAAAGCCAAGACTGAGGATCCCAAAAAGGATTCGCCGAAAAAGGACTCCTCAGAACGAGGTGAAAAACACCCAAGGACTGACTTTAGTGATGTGTCTGATAACAAAGCAGTGCCAGTGGGTGGGGAGAACACACAGAAAGCTGGAGAGGACCAGACCAATGGGAAAGAGGTGAAAAATGAAGTGGAGCCAATGGATGTGGAATCCAACCCCCAGCCAAGTTCAGGGAACTTCAGGGACATGGGAACTTCCTGAATATAAGGAGGGAGGAATCAGTTGCAGACTAAAGGGACATATGTTAAATTGTGTACAGTTATGGCCAATCCCAAATCGACCCCTAGACCCTACCCTCTAGGCACTTCATGTGGATATGAAAGGCTCAGAAAAAATGTATAGCCTATGGTAAAAGCTCATCCTTGCCGTGTGATACTGTAGGTTAGATGGAATTCtcaccatattgcttacaccttACCAATCCTCAGAATGGCATAAATTCTGAGTTCTACGGAAGCTCCTAGGAGGAAGGCGCTAGGTGGTTTCTGGGCAGGGCTTTAACAGAAATATAGTTTTCAGGccttattatattctactgtcctCCATGTTCACATTAGTGGGTTTGTTCTTTTTGTTGGTAAGGATGTATGGATTACTGAATTTATTTGTTCTGATGAAATTGTGTTGTGATGGGGATTCAGACTGAAATCAGTTCTCCATAGTTGATCTTGCAACTGCGAGTAGTTGCGTACTTTGAACTGAGGAGGATGTAAGGATAGTCTGTAATTACAGTCAACATTGAAAAGATGAATTCAATCTCATACAATGAACTGATGCCTGCTTGTTGCAACTTTTTTTAATACACCACTCCGTTCAAAAACTGAATACAGTTTGAATAGTAATTTTGCACACATTGAAATGTACTTTGTATCTAGTATTATCTGTCAATGTTGCGACTACATTGTGTATTATATTTTATTGAAAGCCTCTATGAAATGGGAACAGGATTGTAATGTCATTTGTTTATTTCAAGAATTTTGCACTTCTTTTTTTTGCGGAATGAGAGATATACATGACATtgccaaaaaaaacacaaaaaaaaacatttaactgTTTGATTGTATTCTGTCTTGGAAGTTTTGAAATAATATGAGATGTAGCTATTTGGTTGAACTACTTTGGCTTTGCTGTAAGGATGACATAGTAAGTGTAATCAATAGAATGTGGGTGTTCTTTTCTTATGTTCCAAACAGCGaggctgtttatttatttttttattttttttccaaaATTATTGTATGGTTATCCAAAGGCCTGATCCCCTTCGACTCATTTATTGAATTGCAAATCTCAGGAAAACCCTGTGGGAGATAGTCAACGTTTCTTCCATTTCTGAGGTTCTGTTTGGGTAAGCTTTGTTTTCCACCCTTGTGGAGATGTCATCACGAATGTCTATTTTACAATTTTCAGCAAATGAATTAATATATTCATCATACATGTATTGAAATTGTGTGTGAAAGGGTTGTAAATACACTCCACTTTGGTGGGGTGATGAATGGAATTTGAAAATCCTTTGTCCATGCAACCTACAAACTTGACCCCTTTCCTGTTACATGACAATAAAATAAAGATTGTGCAAGTTA
>XM_036987925.1
TGCTCAGCCAGCAGACAGACATTCATTGACTGCAGACCATTTCACCCTGTCACTCATGTTTGTCGAACCCGTACTGGTACCACGAATCGCGACGATGGATTTTGCTTACCGGGAGGAGGGATGGTTGGTCGGTCGTGGTAGTCATCGAATTTAGGCCTGGAAGTTCAACTCATGTGTAATTATCTTGGCTAGCAGATTTCGCTTTTGGTCTTTCTCAAGCCCACATTGTGACATTGTGTTTTAAATGATGGAGCCGGACGATTTAGTGTGCGTGTATGATTCGACGTGGGACACCGAGAGTGATGGAGACGATCCTGGAGAGAACCAAACGCGTCGCTCAAGCCAGGACAAAACTAAATCATGGACATCTGGTTTAAATCTAACAGATGACGAATGCTCAGAAGAGAGAATGTTCAATTTAAAATTCTATCTCAACGAATACCCCTCCTCCCCTGATGACATTTTCATAGAATCCTTTCATAAAGAATGGAAGACGGACTATAAGAGGCTGGAGAGAGTTCACTCCTACATTCAGTGGTTGTTTCCACTGCGGGAACCAGGAGTGAACTACATGGCCTCTGAGCTCACCAAGAAGGAGATCCTGGCCTTCAGGGAGAGTGAGGAGGCCAAGAAGAGGCTGGTGGAGTCCTACGAGCTCATGCTGGGGTTCTATGGTATCCAGCTGGTCAACAAAGACACAGGTGAGGTCAAACGCGCCGAGAACTGGAGAGAACGCTTCGCCAACCTTGAAAGGAACATGCACAACAACCTCCGCATTACGCGCATCCTGAAGAGCCTGGGGGAGCTAGGCTTTGAGCACTACCAGAGCCCATTGGTGCGCTTCTTCCTGGAGGAGACGCTGGTCAAAAGGAACCTGAGCAGCGTCAAGCGCAGCGTGCTCGACTACTTCCTGTTTGCCATTCGTGACAAGCAGAAGCGCAAAGAGCTTCTGCGCTACGCTTTCCAGCACTTTGAGCCCAAGGAAAAGTTTGTATGGTGCCCCAGAAAGATCCAGAAACAGCTGAAGAAGGCGGAGAAAGGGAACGGAGAGGGAGCGGAGGAAGGCCGCACACGAGCCAAggctagagagggagaggcagtggGAGCCCAGAAGGACAAGGGTGTCacggaggaggtgaaggagactACCAAGTTGAATGATGAAGCATTGAGTAGTGATGGCGATAAGCAGGCTGAAGGTTTTTCTGTTAATCCTTCAGGGACAGCAATCTCCTCAGAGGACTCAGAATCACTGGGAAACGGGAACAGTAATGATCTTGATATGGACCATTCAGGCAGCCCAGACCCTGAGTCTGTTAAAGGAGATCACAGTATGGAGGAAGGACTCAAAGAGGATAGTCAAGCCAAGGACAGCGTCCAGGACTCAGTTAAAGTCAAGGCAGCTGCATCTGAAATGAAGTCCGATAATTTGCCGCAACCGACTAAGAAGAAAAGGGAAGGTGACACGGTGGTGACACGCAACGGTCCTTCAGAGAACTGCCCCAACGGGTGGGAGAAAGGCACAGGCGTCCCTAACGACAACCACCCGCATCAGACGAGCCCATCAGCGGCATCATCCCACAAAGCCAAGACTGAGGATCCCAAAAAGGATTCGCCGAAAAAGGACTCCTCAGAACGAGGTGAAAAACACCCAAGGACTGACTTTAGTGATGTGTCTGATAACAAAGCAGTGCCAGTGGGTGGGGAGAACACACAGAAAGCTGGAGAGGACCAGACCAATGGGAAAGAGGTGAAAAATGAAGTGGAGCCAATGGATGTGGAATCCAACCCCCAGCCAAGTTCAGGGAACTTCAGGGACATGGGAACTTCCTGAATATAAGGAGGGAGGAATCAGTTGCAGACTAAAGGGACATATGTTAAATTGTGTACAGTTATGGCCAATCCCAAATCGACCCCTAGACCCTACCCTCTAGGCACTTCATGTGGATATGAAAGGCTCAGAAAAAATGTATAGCCTATGGTAAAAGCTCATCCTTGCCGTGTGATACTGTAGGTTAGATGGAATTCtcaccatattgcttacaccttACCAATCCTCAGAATGGCATAAATTCTGAGTTCTACGGAAGCTCCTAGGAGGAAGGCGCTAGGTGGTTTCTGGGCAGGGCTTTAACAGAAATATAGTTTTCAGGccttattatattctactgtcctCCATGTTCACATTAGTGGGTTTGTTCTTTTTGTTGGTAAGGATGTATGGATTACTGAATTTATTTGTTCTGATGAAATTGTGTTGTGATGGGGATTCAGACTGAAATCAGTTCTCCATAGTTGATCTTGCAACTGCGAGTAGTTGCGTACTTTGAACTGAGGAGGATGTAAGGATAGTCTGTAATTACAGTCAACATTGAAAAGATGAATTCAATCTCATACAATGAACTGATGCCTGCTTGTTGCAACTTTTTTTAATACACCACTCCGTTCAAAAACTGAATACAGTTTGAATAGTAATTTTGCACACATTGAAATGTACTTTGTATCTAGTATTATCTGTCAATGTTGCGACTACATTGTGTATTATATTTTATTGAAAGCCTCTATGAAATGGGAACAGGATTGTAATGTCATTTGTTTATTTCAAGAATTTTGCACTTCTTTTTTTTGCGGAATGAGAGATATACATGACATtgccaaaaaaaacacaaaaaaaaacatttaactgTTTGATTGTATTCTGTCTTGGAAGTTTTGAAATAATATGAGATGTAGCTATTTGGTTGAACTACTTTGGCTTTGCTGTAAGGATGACATAGTAAGTGTAATCAATAGAATGTGGGTGTTCTTTTCTTATGTTCCAAACAGCGaggctgtttatttatttttttattttttttccaaaATTATTGTATGGTTATCCAAAGGCCTGATCCCCTTCGACTCATTTATTGAATTGCAAATCTCAGGAAAACCCTGTGGGAGATAGTCAACGTTTCTTCCATTTCTGAGGTTCTGTTTGGGTAAGCTTTGTTTTCCACCCTTGTGGAGATGTCATCACGAATGTCTATTTTACAATTTTCAGCAAATGAATTAATATATTCATCATACATGTATTGAAATTGTGTGTGAAAGGGTTGTAAATACACTCCACTTTGGTGGGGTGATGAATGGAATTTGAAAATCCTTTGTCCATGCAACCTACAAACTTGACCCCTTTCCTGTTACATGACAATAAAATAAAGATTGTGCAAGTTA

Function

NR:

description
opioid growth factor receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615595.2 False 3293 mRNA 0.44 7 38868269 38884647
XM_036987925.1 True 3216 mRNA 0.44 6 38868277 38884647

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 835046 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 888440 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 919307 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 962339 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 1138425 37721066 ~ 37729844 (+)
LOC110532013 LOC106571930 coding downstream 1977 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 179503 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 226708 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 355532 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 490721 39375368 ~ 39383225 (+)
G801824 NA non-coding upstream 9323 38858722 ~ 38858946 (+)
G801822 NA non-coding upstream 10822 38857048 ~ 38857447 (+)
G801789 LOC100194703 non-coding upstream 67179 38800876 ~ 38801090 (+)
G801781 NA non-coding upstream 77065 38790890 ~ 38791204 (+)
G801756 NA non-coding upstream 86183 38755623 ~ 38782086 (+)
G801849 NA non-coding downstream 44896 38929543 ~ 38929891 (+)
G801850 NA non-coding downstream 46240 38930887 ~ 38931221 (+)
G801854 NA non-coding downstream 71186 38955833 ~ 38956104 (+)
G801903 NA non-coding downstream 136929 39021576 ~ 39021831 (+)
G801905 NA non-coding downstream 139253 39023900 ~ 39024254 (+)
G801778 NA other upstream 79915 38788061 ~ 38788354 (+)
G800834 NA other upstream 796836 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1297858 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1832351 37034418 ~ 37035918 (+)
G799053 NA other upstream 2551464 36313129 ~ 36316805 (+)
G801851 NA other downstream 48305 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 531228 39415875 ~ 39417460 (+)
adcy6a LOC106566714 other downstream 581326 39465931 ~ 39513879 (+)

Expression


Co-expression Network