LOC110532033


Basic Information

Item Value
gene id LOC110532033
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39514593 ~ 39518610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615619.2
gggcggatccttaagagtcacattagcctacgttagcgcGGGGGACTCATCGATCCTGTAGACCGGTTGGGTTTAGGGAAGATAGGGACGTGCCAAGGATTCAAAATAGCGCTAAACCCGGCTCCACCCACTGATAGGCGGAAGTCCAGCTGATGGGTGGCACTTGTTACCATGGTTCCGTGTAAAACAGAAGACATTGTGATTTATTTACAGAGCGCTTGCCTTGACTTGCCCACGTTTTTATGCTATCCTGGACAGCTTCAGACTGTTGCTGGCGACGGTACTTGATGGCTTTCTTCGGGATAACAAATTTGGGCTATCAAAATCCCATCGGAGACAAGATGCTAGTGAATCCACGAGCGTCTGCTTCCCACCGCGGTAAAAGCACGCCAGACTCCCTGACCTTTACAGATGAGGTTGATTTAAGGAGCTGTACCAAACAGTCAAGACTGCCCCCTATCCAAGTCCAGAGGGGACCCCCAAAATGCACTGATACCTGCAGCATCTACAACCAGCCACCTCCTTTCAGCCCAGACATACACCAGGGGAGCCAGGAGCGATACAGAGAGATGCTCAAACGGGTTCAGACACCCAGATCCCCAAACCAGCTGTACTCAGTGCCcctgacagacagccagcagTGTGGATGGTGGATGCCCAATGGAGGCCAACAGAATACGCAGGAACGCTGGACCCAAGTCAGACGATTCCCCCGCAAGAACAGTGAGATGACCAAGTTTGTGAAAGAGATGTCAATGACGGACCGGGAGTTCAGCTTATTCTGATTTCCTATCCTGCAGTAAGACACACATTCCCACGATCCCAAGACCATTGGGGCTATTGTAAGGACTCTTGTGGTTTGATAAACGGCCACTTTCGTCATAGCATGCTATATTTTTTGGAGCTACTGTATCATGCAGACGTCAATTGACGTCTGCCTTTCAACTGGTACAGTTGAGCTGTTGCCTCCCTCCAGAGGAATGAAATGGTAATACCCACAAGGAAAGAATAGGGAGTTTTGTTTCAGTAATTAGCTACTGTCACTCAGTAAGAGCATTCAGTAGACCTTAGATCATTCAGGAGACCTTGGGGACAGTAACTGAATATCTGGGATCGGGTATATTGTTACGGAATAGTGTCTAGCTGCCAAATATTTGATAGTGTGTTTGTATTTTTGGTAAAGCTTGTATTTTGCATCATTTCAGTACATCAACGAAAGCAATACAATGATAACTAAACGTTTTCCTTGTgttatctttaaaacttttttcTACATCAGCTAACATTACAGTATCATTATTAGGAcatatgaggtcaaaggaatatccagaaatgttttttttttttatgttactgGAACGTTATTAGGCACCagtcattttttaaaactttctGTCGGTACACTTTTGGCGGCATAACAGGCCTTCAGACAATCATGATCTTTGCCCTATCCTAACTCCTCCCTCGCCTGGTAGgatccttccctgttctctcgtATGCAGTGTGCTTTAACTTGCTAGTCCCTTTCCGATATGCACGCGTAAATGTAATGATCTGGGAGAGAGCCACTCTGCCCAAGGAGCGACGCTGTTTCCGATTACAGGGTCATTGAGTGAGTCAGTCAACCCACGCACCCATCTCAATGGTGGCCTTTAAAAATTCAGAGGACGTGGCTGTAGCTACCAAGTTCCTGTATGTTTGGCACTGCAACTCCTTCATGACAGTGCATGGAGGAACAAAGCTACGAATCCTCTCCTGTATGAACGTTTGTGGGTATCTGTGGCTGCTTGCTCTCAACATCCTCTAAGGCTTTCATTGGTCAACATCTGCTCAATGACAATCAGCCAATGGTAATCACAGTTTTTACAGCAGGTAAAGAAAGCTGCACTAATACCGCATACAACTAATCAAAACAGCCATTgattttaagatttttttttattcaagGGGAAATGTTATTTTTCTCTTTGTCAAAGTCCCCAACTCTTGTCCTTCAACTCAGGGGTagaaaacaaactaacaaaaaggAAAGTGTTTCGAAAGGGGTTCATTAGGCCTGAACAAAACACTGTTTCAGTAGCACTGGGACAACCCTCTTCCTCCCCTGTCCCCTAAAAACATCCCAAGAGTCAACAATCAACCTCCACCCAACCCAAAGACAGGAcagcccatagaaatagaatggacACAACGTGCATCATCTTACTTACCACATCCATTCTAtgtattatatttctatgtgaatcACTCTTAGTTGGTCACCTATGTCATTTATCGATCCCATGACCTTTACTGTTGCCTGGCGGTCCCACACGCTCAAGGCCAAATATCACTGCACTGGGAGGGACCAATAGCACGAGGCAGTATTAGCTTGCTTTGGTACGAACATGATCAACTGTTACTGTAGTTGCCATAGTTAAGTATGGTAGAGAGAGGAACGATGACTGGGGTGTTTTGAGGATGTTATGAGGAAACGTAAAGTCAAAATGAACTCAGTGTTGTGTCAATGCTACGGTCAATAACTGATTTAGATTAGCTTTCACAggctctctcgctctacccttcCTGCTCTATGTATAACATACTGTGAAACTCAGATGTGGCAATCAGGCACAGTTCCTGCTCACACTGTATTCTCCAGTGGCTTGTTCAATTAAGCTTGAGTTCAAGTAGGAAATACTGCTCACACTGCTGATTGTGTCCCGTTTCTCTGCCCTGAAGTCCGATAGGAAGGGGATCAGCTCTCCACCTGACTGAGTCGAGTCTTGAAGTAGTGTTTGCTCAAAAAAAGGTACAGTGTATAATTAGTTTATCTGCGTGTAAACACTTCAGTCCTTCGTGATTGGGGAATATGCACCACTTGGGGTTTGATGCAAAAGCGACAGCTAATGGGTATGTGTCAGCAGGTCTAGAGCCAGTGTTtgaatactgtagggtggtgagggAACAGCGCTGAGTGAGTTGGCTGCAGTTGATCAGTTGGTACCAATGAGCTTGAGCTTACGTCTGGCATTTTAAAAGAAAGCGTTCTGCTCTTTGATCCTTATCGTTGGAATGGAAATATCATAATGAGCATAATAATGAATCATAATTCTAATCATAATAATAACAGCCATAAGAATAATGCAAATGATGAATACAGAGGTGATACAAGGTACCCAACGTTAAAAACAGAATGAAAAGAGGATAATACAATCAGACATGCTTTAGAGAAGTTAAGTTTGGCAAGAAAGCAGTTTGTCCCATTATTAAAACCTCACAGTGAAAATAGTTATAGGCCTTCCAAGATGACAAAGCACAGTAATCATTattttcctcgtcaatctacacacaataccccataatgacaaagcacatacaggttttatatatatattttaaacatattttaaa

Function

NR:

description
uncharacterized protein LOC110532033

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615619.2 True 3393 mRNA 0.44 4 39514593 39518610

Neighbor

gene id symbol gene type direction distance location
LOC110531166 LOC106571945 coding downstream 70094 39415850 ~ 39444499 (-)
LOC110532028 prim1 coding downstream 151472 39354229 ~ 39363121 (-)
LOC110532025 LOC107737655 coding downstream 160548 39337906 ~ 39354045 (-)
LOC110532036 LOC106571950 coding upstream 27301 39545911 ~ 39556753 (-)
LOC110532037 LOC106571949 coding upstream 41337 39559947 ~ 39634862 (-)
LOC110532039 LOC106571948 coding upstream 122269 39640879 ~ 39675631 (-)
LOC110532040 aaas coding upstream 198408 39717018 ~ 39724613 (-)
LOC110532044 LOC106571954 coding upstream 228732 39743362 ~ 39773871 (-)
G802672 adcy6 non-coding downstream 7368 39505807 ~ 39507225 (-)
G802606 NA non-coding downstream 118824 39395496 ~ 39395769 (-)
G802564 NA non-coding downstream 213960 39288021 ~ 39300633 (-)
G802558 NA non-coding downstream 266129 39247759 ~ 39248464 (-)
G802551 NA non-coding downstream 277189 39233311 ~ 39237404 (-)
G803065 NA non-coding upstream 163678 39682288 ~ 39682492 (-)
G803080 NA non-coding upstream 212354 39730964 ~ 39731196 (-)
G803094 NA non-coding upstream 244059 39762669 ~ 39765605 (-)
G803095 NA non-coding upstream 244752 39763362 ~ 39766061 (-)
G802609 NA other downstream 100267 39411342 ~ 39414326 (-)
G802602 LOC106571943 other downstream 131383 39380750 ~ 39383210 (-)
G802149 LOC106581475 other downstream 439873 39074481 ~ 39074720 (-)
G802138 NA other downstream 453212 39050530 ~ 39061381 (-)
G802100 NA other downstream 518561 38966456 ~ 38996032 (-)
G803170 LOC106571959 other upstream 425470 39944080 ~ 39949140 (-)
LOC110531168 LOC106571968 other upstream 442857 39961467 ~ 39996984 (-)
selenok selenok other upstream 877122 40395732 ~ 40450018 (-)
G804137 LOC106572278 other upstream 1052404 40571014 ~ 40573950 (-)
G804307 NA other upstream 1343979 40862589 ~ 40912358 (-)

Expression


Co-expression Network