Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531168 |
| gene name | LOC106571968 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 39961467 ~ 39996984 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036986942.1 | False | 8653 | mRNA | 0.52 | 51 | 39962571 | 39996984 |
| TU914000 | False | 791 | TUCP | 0.40 | 3 | 39961467 | 39962981 |
| TU914001 | True | 542 | TUCP | 0.49 | 3 | 39967244 | 39967974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532053 | LOC106571960 | coding | downstream | 2617 | 39952412 ~ 39959954 (-) |
| actr5 | actr5 | coding | downstream | 29861 | 39919618 ~ 39932710 (-) |
| LOC110532049 | LOC106571957 | coding | downstream | 59908 | 39899065 ~ 39902663 (-) |
| LOC118966201 | NA | coding | downstream | 103379 | 39859077 ~ 39859192 (-) |
| LOC118966202 | NA | coding | downstream | 105048 | 39857408 ~ 39857523 (-) |
| LOC110532056 | LOC106571963 | coding | upstream | 54032 | 40051016 ~ 40055551 (-) |
| LOC118966046 | NA | coding | upstream | 138468 | 40135452 ~ 40152692 (-) |
| LOC110531170 | LOC106571977 | coding | upstream | 186986 | 40183970 ~ 40204192 (-) |
| LOC110532066 | LOC106571976 | coding | upstream | 210040 | 40207024 ~ 40219392 (-) |
| chdh | chdh | coding | upstream | 332397 | 40329381 ~ 40339571 (-) |
| G803186 | NA | non-coding | downstream | 11557 | 39950803 ~ 39951014 (-) |
| G803108 | NA | non-coding | downstream | 172286 | 39789152 ~ 39790285 (-) |
| G803107 | NA | non-coding | downstream | 173614 | 39788729 ~ 39788957 (-) |
| G803095 | NA | non-coding | downstream | 196510 | 39763362 ~ 39766061 (-) |
| G803214 | NA | non-coding | upstream | 8114 | 40005098 ~ 40005442 (-) |
| G803216 | NA | non-coding | upstream | 10668 | 40007652 ~ 40008019 (-) |
| G803218 | NA | non-coding | upstream | 12391 | 40009375 ~ 40009581 (-) |
| G803247 | gnas | non-coding | upstream | 43561 | 40040545 ~ 40046580 (-) |
| G803258 | NA | non-coding | upstream | 68086 | 40065070 ~ 40065675 (-) |
| G803170 | LOC106571959 | other | downstream | 13431 | 39944080 ~ 39949140 (-) |
| G802609 | NA | other | downstream | 548245 | 39411342 ~ 39414326 (-) |
| G802602 | LOC106571943 | other | downstream | 579361 | 39380750 ~ 39383210 (-) |
| G802149 | LOC106581475 | other | downstream | 887851 | 39074481 ~ 39074720 (-) |
| G802138 | NA | other | downstream | 901190 | 39050530 ~ 39061381 (-) |
| selenok | selenok | other | upstream | 398748 | 40395732 ~ 40450018 (-) |
| G804137 | LOC106572278 | other | upstream | 574030 | 40571014 ~ 40573950 (-) |
| G804307 | NA | other | upstream | 865605 | 40862589 ~ 40912358 (-) |
| wdr6 | wdr6 | other | upstream | 908388 | 40904738 ~ 40916073 (-) |
| G804255 | NA | other | upstream | 987498 | 40984482 ~ 40985245 (-) |
| G803207 | NA | non-coding | upstream | 28537 | 39996511 ~ 39996916 (-) |
