prkar2aa (LOC106572271)


Basic Information

Item Value
gene id prkar2aa
gene name LOC106572271
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40774165 ~ 40817548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615686.2
CAACTGTGTCTTACGTTCATCCCTGTAGAGTGACCACGCCCCCGAAAATAACGCTCGTGTGGTGGAGcaagaaaaagaaaaaagaagaGCCTCAACTGTAGGCAGAAACGGATTTACCGAATATCACAAGTGACGATACCAACATACCACACATTTTTTTTGAAACACTGGGTAATTTGGATTCAAGGTAACGTCTAGGTTGTCCCTGACGCTCCTTGTTTACAGGAGCTTGGGATACACCGGTTTCGGATTGTCTGAACTGCCTGCAATCGTAACATCAGACGCTTCTAGCTAGCCAGCTTGTTGGCTAGTTTAGTTACCGGTAGCTAACTAAAGTAACGTGATCCATTAGCTATAACCGCCGTTACTTATGCGTATAATAAATACTAAGTCAGCCCTCGGCTATTTAATTATATGTTCTAGTTAGTTTATTTAATCGGAACAAACCTGTTAGCTAAAGTTAACTTACATTCACAAGTCCCACCCTCCAAAGTATAATTAATTATATGCTAAATTAGCTGGATAGTTTGCTAGCTGGTGTAACAGTAGTAAGTAGCTACGTCGTCTGTTCGCTAATCAGCTAGCTAGTTTAACTCAGATTGGATATAattagttagctatctagctaggtcAATTATTCCGTGCTGTTGATATTGATCCGTTATACCATTAGCCGGAGGGGTTGAGCCGCTACCCTGGCAAGGAGACGGGCGAAAAAGAGGAGGCGAAATAAAGAGAACAGGGAGGCCAGCGAGGGAACCAGCTAACGGTCGTTAACATTTGTGCTAACGTTTACGGGTCAGCTGTCATAAAAGCATCTAGCGAGCGAGCGAGCTATCTAGCTAACGCTAACTTACCCAACTTGACAGCTCAGTCAGATATCATAAACTAACGCTAACGTCACTGGTCATATTTCATTCTTTACACAAGACCGACCTCCCTTCGACAAAAAGAAGTGTCACTATTTGCTTGGACATTGTGTTAGCTGGCTTAACTAAGCAACCTCTCCGGTGAACTGCTCATCAATGTCAGCAAGCTAACCCAGTTTCTCTGACGCTATTACCAGTGTCAGCTATCTCACAGTAGCTAACTAGCGTGCTACACATGGACTGATAGAATtcgtagctagctacatttatatttttgtaagAAAAACACAGTATACCTGAACATATTTGTAGTTAGGTAGCGCCATCTAAACACAGTCATGAGTATCGAGATACCGGTGGGATTGACGGAATTGCTGCAAGGCTACACGGTGGAGGTGCTTCGACAGAGGCCACCGGACCTGGTGGAATTCGCCGTGCAATATTTCACGCGCTTGCGGGACACCAGAAGCCAAGATGGGGCGGGTGCTGCTGTCAAGCTCGGGAAAGGAGTGATGTTTGATGGGGAGCCGATGCAAACCGAGTCAAATGGAGACGAAGACGGGTCCGACGAGTCTGATTTCGAGCccCCTCCCCCAAGCAGATACAACCGCAGAGTGTCAGTGTGCGCGGAGGCCTTCAACCCAGATGACGATGACGAGGTGGAGGAGCCGAGGGTGGTGCATCCCAAAACAGACGAGCAGCGCTGCCGGCTGCAGGACGCCTGCAAAGATATTCTACTGTTCAAGACCCTGGAACAGGAGCAGTTCTCGGAAGTCCTGGACGCCATGTTTGAACTGCGCGTACAGCCCCAGGAGCATGTCATCGACCAGGGAGATGACGGAGACAACTTCTACGTTAtcgagagaGGAATCTATGACATAGTGGTACTGATTGATGGCGTAGGGACGTGTGTGGGGCAGTATGACAACAAAGGCAGCTTCGGGGAGTTGGCACTGATGTACAACACCCCCCGCGCTGCCACTATTATTGCCACCCAGGAGGGGGCGCTCTGGGGCCTGGACCGGGCCACGTTCCGTAGGCTCATTGTGAAGAACAATGCCAAGAAGAGGAGGCTGTACGAGCAATTTGTGGAGTCTGTGCCTCTACTGAAGTCTCTggagTTATCCGAGAGGATGAAGATTGTGGATGTATTAGGAATGAAGACGTTTTCCGATGGAGAACGCATCATCATGCAGggggacagggcaGATTGTTTCTACATTGTGGAGACTGGAGAAGTGAAGATTATGATGAAGAGCAAAACAAAGATGacAAAGGCGAACCAGGAGGATAATGTGGAGGTTGAGATCACCCGCTGTAGCAGGGGTCAGTACTTTGGGGAGCTGGCCCTGGTCACCAACAAGCCCCGCGCTGCATCAGTGTATGCTGTGGGAGAGGTCAAGTGCTTGGTAATAGACATTCAGGCGTTTGAGCGTCTGCTGGGTTCCTGTAAGGAGATCATGAAGAGGAACATCACCCACTACGAGGAGCAGCTGGTAGCTCTGTTTGGCTCCAGCATGGACCTGAGAGACTGACCACCCTTCTCCGTGCCTTACACAAGCAAATTTACATGAATGAAAAGATACCTACACATTCAGACGCACCACTTACATAGTATAAGTACACCCTGACACACAGATTTTCTAGCTCAACCCTCCTTTATAAGCTCACTAATAGGTGTACACACACTTTCTACTCACCCCGAAATATCACACGCCCTCTTACAGTTGCTTGAACCTGCTTCAGCCTCTTTGTTTTGAATTGAAAAAGCAATGTCCCTGCTGATACAACCCTGCCACCGCCACAGCACAGCAAGGACATACTACACGCGTGCACTCAGACATGAAGGCTTGTCCTTTCTctcacagatgcacacacacacacacacacacacacacaccaaacctcAGCCAAGGACCCATGCGCACACACAGGCACCACCCACACTTTCAAATACAGACACCTGGTGAAAAAGAACATACATTTAAAAAGAGAGCAAATTAAAAAAGTAAAAAGGTTTAAAGAGAAGTTTTAGAATCATTTTATGAAGATAAACCGAAGCTTTGATAAAATATGATTTAAATAAAAAAGTGTTTATTTGGGGTTGAGTCCTTTCTGAAAGCTCCCCTGCTGTTGTTGATTGATTCAGTTAGTGCCGGTGATTACCACAGAGGACCCTACGTTTCAGGGCTATTGTTATCATTAATCCACACATGTTGTATTGATTAATGTATTATTATATATTCATTATTTTGTTTTACTTTGACCAATTCAGATATAAAGCACCATCTCCGACAATGTCAAACAAAAATCTAGTGCTTATTTCTCCTTGATCATTCTGAATGAGTTGTCCTGGATAAGAATAAAGCAAACATTTTTATTATA
>XM_021615687.2
AATCAACTGTGTCTTACGTTCATCCCTGTAGAGTGACCACGCCCCCGAAAATAACGCTCGTGTGGTGGAGcaagaaaaagaaaaaagaagaGCCTCAACTGTAGGCAGAAACGGATTTACCGAATATCACAAGTGACGATACCAACATACCACACATTTTTTTTGAAACACTGGGTAATTTGGATTCAAGGTAACGTCTAGGTTGTCCCTGACGCTCCTTGTTTACAGGAGCTTGGGATACACCGGTTTCGGATTGTCTGAACTGCCTGCAATCGTAACATCAGACGCTTCTAGCTAGCCAGCTTGTTGGCTAGTTTAGTTACCGGTAGCTAACTAAAGTAACGTGATCCATTAGCTATAACCGCCGTTACTTATGCGTATAATAAATACTAAGTCAGCCCTCGGCTATTTAATTATATGTTCTAGTTAGTTTATTTAATCGGAACAAACCTGTTAGCTAAAGTTAACTTACATTCACAAGTCCCACCCTCCAAAGTATAATTAATTATATGCTAAATTAGCTGGATAGTTTGCTAGCTGGTGTAACAGTAGTAAGTAGCTACGTCGTCTGTTCGCTAATCAGCTAGCTAGTTTAACTCAGATTGGATATAattagttagctatctagctaggtcAATTATTCCGTGCTGTTGATATTGATCCGTTATACCATTAGCCGGAGGGGTTGAGCCGCTACCCTGGCAAGGAGACGGGCGAAAAAGAGGAGGCGAAATAAAGAGAACAGGGAGGCCAGCGAGGGAACCAGCTAACGGTCGTTAACATTTGTGCTAACGTTTACGGGTCAGCTGTCATAAAAGCATCTAGCGAGCGAGCGAGCTATCTAGCTAACGCTAACTTACCCAACTTGACAGCTCAGTCAGATATCATAAACTAACGCTAACGTCACTGGTCATATTTCATTCTTTACACAAGACCGACCTCCCTTCGACAAAAAGAAGTGTCACTATTTGCTTGGACATTGTGTTAGCTGGCTTAACTAAGCAACCTCTCCGGTGAACTGCTCATCAATGTCAGCAAGCTAACCCAGTTTCTCTGACGCTATTACCAGTGTCAGCTATCTCACAGTAGCTAACTAGCGTGCTACACATGGACTGATAGAATtcgtagctagctacatttatatttttgtaagAAAAACACAGTATACCTGAACATATTTGTAGTTAGGTAGCGCCATCTAAACACAGTCATGAGTATCGAGATACCGGTGGGATTGACGGAATTGCTGCAAGGCTACACGGTGGAGGTGCTTCGACAGAGGCCACCGGACCTGGTGGAATTCGCCGTGCAATATTTCACGCGCTTGCGGGACACCAGAAGCCAAGATGGGGCGGGTGCTGCTGTCAAGCTCGGGAAAGGAGTGATGTTTGATGGGGAGCCGATGCAAACCGAGTCAAATGGAGACGAAGACGGGTCCGACGAGTCTGATTTCGAGCccCCTCCCCCAAGCAGATACAACCGCAGAGTGTCAGTGTGCGCGGAGGCCTTCAACCCAGATGACGATGACGAGGTGGAGGAGCCGAGGGTGGTGCATCCCAAAACAGACGAGCAGCGCTGCCGGCTGCAGGACGCCTGCAAAGATATTCTACTGTTCAAGACCCTGGAACAGGAGCAGTTCTCGGAAGTCCTGGACGCCATGTTTGAACTGCGCGTACAGCCCCAGGAGCATGTCATCGACCAGGGAGATGACGGAGACAACTTCTACGTTAtcgagagaGGAATCTATGACATAGTGGTACTGATTGATGGCGTAGGGACGTGTGTGGGGCAGTATGACAACAAAGGCAGCTTCGGGGAGTTGGCACTGATGTACAACACCCCCCGCGCTGCCACTATTATTGCCACCCAGGAGGGGGCGCTCTGGGGCCTGGACCGGGCCACGTTCCGTAGGCTCATTGTGAAGAACAATGCCAAGAAGAGGAGGCTGTACGAGCAATTTGTGGAGTCTGTGCCTCTACTGAAGTCTCTggagTTATCCGAGAGGATGAAGATTGTGGATGTATTAGGAATGAAGACGTTTTCCGATGGAGAACGCATCATCATGCAGggggacagggcaGATTGTTTCTACATTGTGGAGACTGGAGAAGTGAAGATTATGATGAAGAGCAAAacAAAGGCGAACCAGGAGGATAATGTGGAGGTTGAGATCACCCGCTGTAGCAGGGGTCAGTACTTTGGGGAGCTGGCCCTGGTCACCAACAAGCCCCGCGCTGCATCAGTGTATGCTGTGGGAGAGGTCAAGTGCTTGGTAATAGACATTCAGGCGTTTGAGCGTCTGCTGGGTTCCTGTAAGGAGATCATGAAGAGGAACATCACCCACTACGAGGAGCAGCTGGTAGCTCTGTTTGGCTCCAGCATGGACCTGAGAGACTGACCACCCTTCTCCGTGCCTTACACAAGCAAATTTACATGAATGAAAAGATACCTACACATTCAGACGCACCACTTACATAGTATAAGTACACCCTGACACACAGATTTTCTAGCTCAACCCTCCTTTATAAGCTCACTAATAGGTGTACACACACTTTCTACTCACCCCGAAATATCACACGCCCTCTTACAGTTGCTTGAACCTGCTTCAGCCTCTTTGTTTTGAATTGAAAAAGCAATGTCCCTGCTGATACAACCCTGCCACCGCCACAGCACAGCAAGGACATACTACACGCGTGCACTCAGACATGAAGGCTTGTCCTTTCTctcacagatgcacacacacacacacacacacacacacaccaaacctcAGCCAAGGACCCATGCGCACACACAGGCACCACCCACACTTTCAAATACAGACACCTGGTGAAAAAGAACATACATTTAAAAAGAGAGCAAATTAAAAAAGTAAAAAGGTTTAAAGAGAAGTTTTAGAATCATTTTATGAAGATAAACCGAAGCTTTGATAAAATATGATTTAAATAAAAAAGTGTTTATTTGGGGTTGAGTCCTTTCTGAAAGCTCCCCTGCTGTTGTTGATTGATTCAGTTAGTGCCGGTGATTACCACAGAGGACCCTACGTTTCAGGGCTATTGTTATCATTAATCCACACATGTTGTATTGATTAATGTATTATTATATATTCATTATTTTGTTTTACTTTGACCAATTCAGATATAAAGCACCATCTCCGACAATGTCAAACAAAAATCTAGTGCTTATTTCTCCTTGATCATTCTGAATGAGTTGTCCTGGATAAGAATAAAGCAAACATTTTTATTATA

Function

NR:

description
cAMP-dependent protein kinase type II-alpha regulatory subunit-like isoform X2

GO: NA

KEGG:

id description
K04739 PRKAR; cAMP-dependent protein kinase regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615686.2 False 3254 mRNA 0.46 11 40774165 40817545
XM_021615687.2 True 3248 mRNA 0.46 10 40774165 40817548

Neighbor

gene id symbol gene type direction distance location
LOC118965936 NA coding downstream 11727 40760552 ~ 40762438 (-)
LOC110532074 LOC106572274 coding downstream 15149 40745623 ~ 40759016 (-)
zgc:136971 LOC106572275 coding downstream 30472 40731121 ~ 40743693 (-)
LOC110531175 sema3g coding downstream 114726 40592586 ~ 40659439 (-)
selenok selenok coding downstream 324147 40395732 ~ 40450018 (-)
mgll mgll coding upstream 26519 40844067 ~ 40866839 (-)
LOC110532083 NA coding upstream 59493 40877041 ~ 40878945 (-)
LOC110532079 LOC106572269 coding upstream 68930 40886478 ~ 40897584 (-)
LOC118966048 LOC106572305 coding upstream 80476 40898024 ~ 40904180 (-)
wdr6 wdr6 coding upstream 87190 40904738 ~ 40916073 (-)
G804206 NA non-coding downstream 5581 40767109 ~ 40768584 (-)
G804245 NA non-coding downstream 7459 40766345 ~ 40766706 (-)
G804240 NA non-coding downstream 8787 40764617 ~ 40765378 (-)
G804239 NA non-coding downstream 13969 40759647 ~ 40760196 (-)
G804241 NA non-coding downstream 14589 40759344 ~ 40759576 (-)
G804262 LOC106572270 non-coding upstream 100359 40917907 ~ 40918478 (-)
LOC110531177 celsr3 non-coding upstream 101232 40918726 ~ 40972151 (-)
G804247 NA non-coding upstream 165856 40983404 ~ 40984266 (-)
G804259 NA non-coding upstream 191341 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 192503 41010051 ~ 41010825 (-)
G804137 LOC106572278 other downstream 200215 40571014 ~ 40573950 (-)
LOC110531168 LOC106571968 other downstream 806191 39961467 ~ 39996984 (-)
G803170 LOC106571959 other downstream 825025 39944080 ~ 39949140 (-)
G802609 NA other downstream 1359839 39411342 ~ 39414326 (-)
G804307 NA other upstream 45041 40862589 ~ 40912358 (-)
G804255 NA other upstream 166934 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 619482 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1310304 42125255 ~ 42141613 (-)

Expression


Co-expression Network