LOC110532083


Basic Information

Item Value
gene id LOC110532083
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40877041 ~ 40878945 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053248.1
tccccgggtccagaacaaattcaagggaacattcagtattatacagagccatgagtgcatgtaACTCCCTTCCATCTAATATAGCGCAAGTGAATAGCAAACctggttttaaaaaaaatcaataaagcaacacctcttccccatgttcatgtttttaaatgtatgtaaattgtctgtaatgtcttcttcgtcatgtgtcggaccccagtaagactcgCTGTCACGTTTGGCGTTGTCTAATGGGAATCATAATAAATCAAACAAAATATCTTTCtaatccctctccctcttctcccaggTGGCTAGTGCTCTTTCAGCCATGGTGATTCTAGTCATCATGCTGTAGATTGGGGCTGTCTTTGGGGAGCTGCCAAAGGAAGTGTTGGCAGCCATCGTCTATGGGAACCTGCGTGGCATGATGAAACAGTTCATGgatatgCTGGTGTGGATGGCCACTCTGATCCTGACCGTGCTCTTCAAACCTGGCCTATGCCTGGCAGCCTCCATTGCCTTCTCGATGCTCACGGTCATCTTCAGGACCCAGCTTTTCAGGCCAAAGTACTCCTCTTCTAGGTCAGGTCCCTGAGACTGACATCTACAGACCAGTGGAGGACTATAATCTGTAATGTGTCCATGGAGACAAGATAAATACGTAAATATACAATACATATTCAGTTACTCTCTAATCATACTGCCACTCAATCAATGGGAAATCTTTAACTTGTACCAGGGCTATGTCTGTGAAGGTGTTTCACTTACATTTTCGGCAGTATATCAGTTGTTAAGTGAACTTTAACTCCGGAGTGAAGTATCACCTAGGTAcatatctaggatcagcttcccctcccccaatcctaccattagtggggaaaatgcaaAATGGACCCAAAATCAGCATCTGATGTGTAATGACACAGCAACAGATATCATCACATCTTTAGCCAACTTGGTCTCAGagtattttgtattattctgtatgtaaatctgaaACACTCCATTTGTGCGTTGCCTCATGGGTTTCCATTTCGCGGCTGGCACGGGtctcgaaccagcatctgtagcaactcAGTTTGTACTGCGATGTAGTGTCTTAATAcaccactcgggaggctccaTTTACAAACGTTTT

Function

NR:

description
PREDICTED: solute carrier family 26 member 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053248.1 True 1129 mRNA 0.44 4 40877041 40878945

Neighbor

gene id symbol gene type direction distance location
mgll mgll coding downstream 10202 40844067 ~ 40866839 (-)
prkar2aa LOC106572271 coding downstream 59493 40774165 ~ 40817548 (-)
LOC118965936 NA coding downstream 114603 40760552 ~ 40762438 (-)
LOC110532074 LOC106572274 coding downstream 118025 40745623 ~ 40759016 (-)
zgc:136971 LOC106572275 coding downstream 133348 40731121 ~ 40743693 (-)
LOC110532079 LOC106572269 coding upstream 7533 40886478 ~ 40897584 (-)
LOC118966048 LOC106572305 coding upstream 19079 40898024 ~ 40904180 (-)
wdr6 wdr6 coding upstream 25793 40904738 ~ 40916073 (-)
LOC110531177 celsr3 coding upstream 39781 40918726 ~ 40972151 (-)
dalrd3 dalrd3 coding upstream 106524 40985469 ~ 41000703 (-)
G804273 NA non-coding downstream 89143 40787523 ~ 40787898 (-)
G804206 NA non-coding downstream 108457 40767109 ~ 40768584 (-)
G804245 NA non-coding downstream 110335 40766345 ~ 40766706 (-)
G804240 NA non-coding downstream 111663 40764617 ~ 40765378 (-)
G804239 NA non-coding downstream 116845 40759647 ~ 40760196 (-)
G804262 LOC106572270 non-coding upstream 38962 40917907 ~ 40918478 (-)
G804247 NA non-coding upstream 104459 40983404 ~ 40984266 (-)
G804259 NA non-coding upstream 129944 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 131106 41010051 ~ 41010825 (-)
G804137 LOC106572278 other downstream 303091 40571014 ~ 40573950 (-)
selenok selenok other downstream 427101 40395732 ~ 40450018 (-)
LOC110531168 LOC106571968 other downstream 909067 39961467 ~ 39996984 (-)
G803170 LOC106571959 other downstream 927901 39944080 ~ 39949140 (-)
G802609 NA other downstream 1462715 39411342 ~ 39414326 (-)
G804255 NA other upstream 105537 40984482 ~ 40985245 (-)
G804543 LOC106572259 other upstream 558085 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1248907 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 2452985 43331930 ~ 43339589 (-)

Expression


Co-expression Network