dalrd3 (dalrd3)


Basic Information

Item Value
gene id dalrd3
gene name dalrd3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40985469 ~ 41000703 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615692.2
GCACTCTACAGTTCCGCATTGTGGTTATCATGCAGTCATTCACAGCCAATACGAGATCGATCGACTAGAGCAGAGGAACAAATGTTTTGTCTATTTGAAAAGTTAGCTGTCATAAACACAAATGATTACTATACCGTTTAGCTCAGTTGAAGTGATGATTAGGTTGTGAGTTAGTGATGGAGAACATTGACGAGACACCGTTTCGGATCACCCGTACCGTCCAAGCTCTGGGCTCCGCACTACGGGGAGAGCCTGAACATGTTCCCGATGCCGGTCAGGGTAGCAGTGACAGAATCTCGAGTGAGCCGGAGAAGCTTTGGTTTAAAGAAAGCAGCGCTAAGAATCTCCAAAACAGGGATTTCTTGTCACCCACTACGGTGCTGAATACGCTTTATGCAGACGGACAGGTTCCCCCAGCAGTGATGGGTAGAGTGCTGTCCCTGAAAGGGTGTGGGGTTCTCCCTGTGGCTGGTGGGGAGGTCATGGGAGAGGGGCTGAGGGTGCGGGTTGACCGGATTGCCGCGTTTCAGAAGGTCCTGAGTGGAGTGTCGGCGTACCTGAAGCCTCCTAGCCAGAGACAGGGGGGTGTGGTGCTCAACTGCCCGGCCCTTCACCCCAAACCCAATTTACCCTCCCCGGACACACTCACGCTGGGGCAACTACGCACCGTTCTGTTGACTGACCACTTAGGGGCGCTACTGAGGAGACAGGGGTTTACTGTGTCCTGCTGCCCTGTGCTGCCTGAAGATAGCAACATCATCGTCTTCCTCCGAATACTTGGCGTCGATTGGCCGTCAGTGCCGGTCAGCTGGACCAAtgacgagagggaggagaagatgttGGAGGCTTTACAGAATTCCCCGtacaaagaaagagaggagacagatggaggaaggCGAGAGAGTGAAGaaaagaagatggagggagagaaggagtgggggACGCTCAGAGTGAACTTGAAGAGGGTGTTTCAGGAGGAGCAGCTGCCAGGGTATGACCCCAGCCTGGGTACCTGTACAGTGCAACGAGACAGTGTGTCTCATCTGGCCCAACTGGACAGGGCTACTGCAGACTGCACAGTATCCACAGCAACCGCGGTACATGTCACGTCCTGTCAGGATGAGTTCCGTCAGCAGCAGATAGCGATGCTATGGAGAGCCAGCGGTGCAACATTGACACAGAGGCATCTAGTTTGTGGACCAGTGAAGACTCCTGGAAGTCACCTCAGTGCGGCCCAGTATCTCCAACTGAGAAGAGTGCAGATGAAGGAGGCCTCAGAGATGAAGTACGGAGAACAAGTCGAAGGTCAGACTTGGGATGACATCATCAAGGTCATGACCTCCGCCACTGTGAGGTTTGAGCTGCTCTCAACGGTCCATATGAGCCCGGTCACCCTGGACGTGCAGAGGGAAGGCAGTGTGTCCACCAAAGGCCCCAGAGGCGGAGTCTTTGTCATGTACAACTGTGCTCGGCTCCACACCCTCTTTGACAGTTACGAGCGAGGCATGGAGAAGGGACTTTACCCTGAAATCCCAGAGGGCTCCCAGTTGGACTTCTCAGCTCTAAAAGAAGAGGGGGAGTGGCTTCTTCTGTTCAATTACCTCATTCCATTCTCTGAGCTTCTCGACCAATCAGGACAGGCGTTGGAGTGTGATGGAGGGGCCAGAGTCAACCTGAAGACTGAACAGATCTGCAAGTTCCTGGTGTCTCTCAGTAAAGATTTTAGCTCCTATTACAACAGAGTCCACGTCCTTGGGGAGCCGTTGCCTCACCTCTTCAATCAGATGTTCTGTCGGCTGCAGTTGTTGAGAGCACTGAGAGAGCTCTACCATCGCGCGTTGGATACTCTTCACCTTCCTCCCATCCGGCAGCTATAGCCACAAATACCCCAACTGTAGCCCCAACATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCAACTGTAGCCCCGAATATAGTCCCAACTGTAGCCCCAACAAATGCCACCAAAATGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCTGAATATAGCTCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCTCGAATATAGCCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCATCAAATGCCCCCAAAATACCCCAACTGTAGCCTCGAATATAGCCCCAACATGCCCCAACAAATGCCCCCAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAATCCCCTAAAATACCCCAACTGTAGCCCCGAATATAGCCCCAACTGTAGCCCCAACAAATGCCCCCAAAATACCCCAACTATGCCCCATGAACTGCCCCAAATATAAGGCCTAATAACTGCCGTAAATTATCACTAGCCTATCCCCTACATGAAATACACATATAAATGTCACttttactactgtactgtagctattaGGCTTTTATCCCCCCCAATTAAAAAACCCTGTGAAGTCCTCTTTATGTATATGTGACATACACCTGGTATTACACCCAGTCTATTTACTGTTGATGAAAGAAACTGTAGAGATAATTTGCACCCCTGTGTGAAGCCTTGGTCTCCCCAGACGTATCACCAGTATCTCTGATGCACCACAGATGCAGCCTCTACCAGAGACCCTCACTGCCTTTGAACGATGAACATCTGCCTGTCTTCGGTCTTCCCTTCTACGATACCATAGACACTATTCCGCTAACAGACAACTGCCCTAGAGCCATAGATACAgtatttacacacactgtatgtacACCGTGTAAGCACTGCCCCTGTCCTCATCACTAGATATTGCTCCTGGCCACCATGAGCCATTTACTGtccccttctcccttcccctcctacttgaataatacaaatatatatatttcattggAA

Function

symbol description
dalrd3 Predicted to enable ATP binding activity and arginine-tRNA ligase activity. Predicted to act upstream of or within arginyl-tRNA aminoacylation. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 86. Orthologous to human DALRD3 (DALR anticodon binding domain containing 3).

NR:

description
DALR anticodon-binding domain-containing protein 3-like

GO: NA

KEGG:

id description
K24973 DALRD3; DALR anticodon-binding domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615692.2 True 3261 mRNA 0.51 13 40985469 41000703

Neighbor

gene id symbol gene type direction distance location
LOC110531177 celsr3 coding downstream 13318 40918726 ~ 40972151 (-)
wdr6 wdr6 coding downstream 69396 40904738 ~ 40916073 (-)
LOC118966048 LOC106572305 coding downstream 81289 40898024 ~ 40904180 (-)
LOC110532079 LOC106572269 coding downstream 87885 40886478 ~ 40897584 (-)
LOC110532083 NA coding downstream 106524 40877041 ~ 40878945 (-)
impdh2 LOC106566785 coding upstream 12676 41013379 ~ 41024793 (-)
arih2 arih2 coding upstream 25547 41026250 ~ 41034402 (-)
xpc xpc coding upstream 40596 41041299 ~ 41053107 (-)
borcs6 LOC106572262 coding upstream 88315 41089018 ~ 41095989 (-)
sema3h LOC106572304 coding upstream 98037 41098740 ~ 41127371 (-)
G804247 NA non-coding downstream 1203 40983404 ~ 40984266 (-)
G804262 LOC106572270 non-coding downstream 66991 40917907 ~ 40918478 (-)
G804273 NA non-coding downstream 197571 40787523 ~ 40787898 (-)
G804206 NA non-coding downstream 216885 40767109 ~ 40768584 (-)
G804259 NA non-coding upstream 8186 41008889 ~ 41009137 (-)
G804269 NA non-coding upstream 9348 41010051 ~ 41010825 (-)
G804353 NA non-coding upstream 34869 41035572 ~ 41035777 (-)
G804354 NA non-coding upstream 35117 41035820 ~ 41036083 (-)
G804355 NA non-coding upstream 36361 41037064 ~ 41037539 (-)
G804255 NA other downstream 224 40984482 ~ 40985245 (-)
G804307 NA other downstream 73111 40862589 ~ 40912358 (-)
G804137 LOC106572278 other downstream 411519 40571014 ~ 40573950 (-)
selenok selenok other downstream 535529 40395732 ~ 40450018 (-)
G804543 LOC106572259 other upstream 436327 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 1127149 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 2331227 43331930 ~ 43339589 (-)
prdm16 prdm16 other upstream 2939863 43781726 ~ 44015554 (-)
tafa5l LOC106572193 other upstream 3248095 44247091 ~ 44292397 (-)

Expression


Co-expression Network