Gene
RNA
| Item | Value |
|---|---|
| gene id | borcs6 |
| gene name | LOC106572262 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 41089018 ~ 41095989 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| BLOC-1-related complex subunit 6-like |
| id | description |
|---|---|
| K20820 | BORCS6; BLOC-1 related complex subunit 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036988004.1 | False | 2393 | mRNA | 0.56 | 6 | 41089018 | 41095959 |
| XM_021615699.2 | False | 2144 | mRNA | 0.53 | 6 | 41089901 | 41095881 |
| XM_021615698.2 | True | 1586 | mRNA | 0.59 | 7 | 41089901 | 41095989 |
41,083,000
41,084,000
41,085,000
41,086,000
41,087,000
41,088,000
41,089,000
41,090,000
41,091,000
41,092,000
41,093,000
41,094,000
41,095,000
41,096,000
41,097,000
41,098,000
41,099,000
41,100,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| xpc | xpc | coding | downstream | 35911 | 41041299 ~ 41053107 (-) |
| arih2 | arih2 | coding | downstream | 54616 | 41026250 ~ 41034402 (-) |
| impdh2 | LOC106566785 | coding | downstream | 64225 | 41013379 ~ 41024793 (-) |
| dalrd3 | dalrd3 | coding | downstream | 88315 | 40985469 ~ 41000703 (-) |
| LOC110531177 | celsr3 | coding | downstream | 116867 | 40918726 ~ 40972151 (-) |
| sema3h | LOC106572304 | coding | upstream | 2751 | 41098740 ~ 41127371 (-) |
| rhoab | LOC106572261 | coding | upstream | 45778 | 41141767 ~ 41147730 (-) |
| tmem115 | LOC106572260 | coding | upstream | 62090 | 41158079 ~ 41164529 (-) |
| LOC110532095 | LOC106572303 | coding | upstream | 71239 | 41167228 ~ 41237253 (-) |
| LOC110532099 | LOC106572257 | coding | upstream | 368670 | 41464659 ~ 41491370 (-) |
| G804355 | NA | non-coding | downstream | 51479 | 41037064 ~ 41037539 (-) |
| G804354 | NA | non-coding | downstream | 52935 | 41035820 ~ 41036083 (-) |
| G804353 | NA | non-coding | downstream | 53241 | 41035572 ~ 41035777 (-) |
| G804269 | NA | non-coding | downstream | 78193 | 41010051 ~ 41010825 (-) |
| G804259 | NA | non-coding | downstream | 79881 | 41008889 ~ 41009137 (-) |
| G804407 | NA | non-coding | upstream | 36535 | 41132524 ~ 41132750 (-) |
| G804423 | NA | non-coding | upstream | 82855 | 41178844 ~ 41179405 (-) |
| G804425 | NA | non-coding | upstream | 91293 | 41187282 ~ 41187525 (-) |
| G804470 | NA | non-coding | upstream | 199960 | 41295949 ~ 41370370 (-) |
| G804548 | NA | non-coding | upstream | 349443 | 41445432 ~ 41445637 (-) |
| G804255 | NA | other | downstream | 103773 | 40984482 ~ 40985245 (-) |
| wdr6 | wdr6 | other | downstream | 173044 | 40904738 ~ 40916073 (-) |
| G804307 | NA | other | downstream | 176660 | 40862589 ~ 40912358 (-) |
| G804137 | LOC106572278 | other | downstream | 515068 | 40571014 ~ 40573950 (-) |
| selenok | selenok | other | downstream | 639078 | 40395732 ~ 40450018 (-) |
| G804543 | LOC106572259 | other | upstream | 341041 | 41437030 ~ 41437971 (-) |
| LOC110532119 | LOC106572245 | other | upstream | 1031863 | 42125255 ~ 42141613 (-) |
| G806724 | LOC106572208 | other | upstream | 2235941 | 43331930 ~ 43339589 (-) |
| prdm16 | prdm16 | other | upstream | 2844577 | 43781726 ~ 44015554 (-) |
| tafa5l | LOC106572193 | other | upstream | 3152809 | 44247091 ~ 44292397 (-) |
